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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_02g118300v5   uncharacterized protein 
 ath-u.5   PRH75   DEAD box RNA helicase (PRH75) 
 gma-u.5   100820207   DEAD-box ATP-dependent RNA helicase 7 
 gma-u.5   100805921   DEAD-box ATP-dependent RNA helicase 7 
 sly-u.5   101243764   DEAD-box ATP-dependent RNA helicase 7-like 
 sly-u.5   101245658   DEAD-box ATP-dependent RNA helicase 7 
 osa-u.5   4347610   DEAD-box ATP-dependent RNA helicase 7-like 
 zma-u.5   103633047   DEAD-box ATP-dependent RNA helicase 7 
 zma-u.5   100193061   DEAD-box ATP-dependent RNA helicase 7 
 vvi-u.5   100258263   DEAD-box ATP-dependent RNA helicase 7 
 ppo-u.5   7476774   DEAD-box ATP-dependent RNA helicase 7 
 ppo-u.5   7482169   DEAD-box ATP-dependent RNA helicase 7 
 mtr-u.5   25496562   DEAD-box ATP-dependent RNA helicase 7 
 mtr-u.5   11409014   DEAD-box ATP-dependent RNA helicase 7 

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Top 50 coexpressed genes to CHLRE_02g118300v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_02g118300v5 (cre-r.1 coexpression data)

CoexMap"5727965"


creCHLRE_02g118300v5 | Entrez gene ID : 5727965      
Species cre ath gma sly osa zma vvi ppo mtr ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 1 1 2 2 1 2 1 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003724 [list] [network] RNA helicase activity  (44 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_001702450.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4,  pero 1,  cysk 1  (predict for XP_001702450.1)
Subcellular
localization
TargetP
other 8  (predict for XP_001702450.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_02g118300v5

.
ath-u.5
for
PRH75

.
gma-u.5
for
100820207

.
gma-u.5
for
100805921

.
sly-u.5
for
101243764

.
sly-u.5
for
101245658

.
osa-u.5
for
4347610

.
zma-u.5
for
103633047

.
zma-u.5
for
100193061

.
vvi-u.5
for
100258263

.
ppo-u.5
for
7476774

.
ppo-u.5
for
7482169

.
mtr-u.5
for
25496562

.
mtr-u.5
for
11409014

.


Ortholog ID: 5396
Species ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol PRH75 LOC100805921 LOC100820207 LOC101243764 LOC101245658 LOC4347610 LOC100193061 LOC103633047 LOC103854992 LOC103837405 LOC100258263 LOC7476774 LOC7482169 LOC11409014 LOC25496562 LOC123112752 LOC123122230 LOC123399988 LOC107947274 LOC107931029 LOC111216227 LOC106388076 CHLRE_02g118300v5 LOC8054863 LOC102601822 LOC102582907 LOC102628005 LOC100837934 LOC107818827 LOC107816023
Function* DEAD box RNA helicase (PRH75) DEAD-box ATP-dependent RNA helicase 7 DEAD-box ATP-dependent RNA helicase 7 DEAD-box ATP-dependent RNA helicase 7-like DEAD-box ATP-dependent RNA helicase 7 DEAD-box ATP-dependent RNA helicase 7-like DEAD-box ATP-dependent RNA helicase 7 DEAD-box ATP-dependent RNA helicase 7 DEAD-box ATP-dependent RNA helicase 7 DEAD-box ATP-dependent RNA helicase 7 DEAD-box ATP-dependent RNA helicase 7 DEAD-box ATP-dependent RNA helicase 7 DEAD-box ATP-dependent RNA helicase 7 DEAD-box ATP-dependent RNA helicase 7 DEAD-box ATP-dependent RNA helicase 7 DEAD-box ATP-dependent RNA helicase 7 DEAD-box ATP-dependent RNA helicase 7 DEAD-box ATP-dependent RNA helicase 7 DEAD-box ATP-dependent RNA helicase 7 DEAD-box ATP-dependent RNA helicase 7 DEAD-box ATP-dependent RNA helicase 7-like DEAD-box ATP-dependent RNA helicase 7 uncharacterized protein DEAD-box ATP-dependent RNA helicase 7 DEAD-box ATP-dependent RNA helicase 7-like DEAD-box ATP-dependent RNA helicase 7-like DEAD-box ATP-dependent RNA helicase 7 DEAD-box ATP-dependent RNA helicase 7 DEAD-box ATP-dependent RNA helicase 7-like DEAD-box ATP-dependent RNA helicase 7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 2
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
vvi04141 Protein processing in endoplasmic reticulum 3
vvi03015 mRNA surveillance pathway 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi01230 Biosynthesis of amino acids 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot04144 Endocytosis 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836340 100805921 100820207 101243764 101245658 4347610 100193061 103633047 103854992 103837405 100258263 7476774 7482169 11409014 25496562 123112752 123122230 123399988 107947274 107931029 111216227 106388076 5727965 8054863 102601822 102582907 102628005 100837934 107818827 107816023
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