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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_10g422000v5   uncharacterized protein 
 ath-u.5   AT3G02320   N2,N2-dimethylguanosine tRNA methyltransferase 
 ath-u.5   AT5G15810   tRNA (guanine(26)-N(2))-dimethyltransferase 
 gma-u.5   100777825   probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 
 gma-u.5   100800256   probable tRNA (guanine(26)-N(2))-dimethyltransferase 2 
 sly-u.5   101251638   tRNA (guanine(26)-N(2))-dimethyltransferase 1 
 osa-u.5   4334353   tRNA (guanine(26)-N(2))-dimethyltransferase 1 
 osa-u.5   4348435   tRNA (guanine(26)-N(2))-dimethyltransferase 1 
 zma-u.5   100275038   probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 
 zma-u.5   100382564   uncharacterized LOC100382564 
 zma-u.5   100274276   uncharacterized LOC100274276 
 vvi-u.5   100242902   tRNA (guanine(26)-N(2))-dimethyltransferase 2 
 ppo-u.5   7480595   probable tRNA (guanine(26)-N(2))-dimethyltransferase 2 
 ppo-u.5   18107341   probable tRNA (guanine(26)-N(2))-dimethyltransferase 2 
 mtr-u.5   25495421   probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 

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Top 50 coexpressed genes to CHLRE_10g422000v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_10g422000v5 (cre-r.1 coexpression data)

CoexMap"5728252"


creCHLRE_10g422000v5 | Entrez gene ID : 5728252    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 2 2 1 2 3 1 2 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0002940 [list] [network] tRNA N2-guanine methylation  (2 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
Protein XP_042919887.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4,  mito 1,  pero 1  (predict for XP_042919887.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042919887.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_10g422000v5

.
ath-u.5
for
AT3G02320

.
ath-u.5
for
AT5G15810

.
gma-u.5
for
100777825

.
gma-u.5
for
100800256

.
sly-u.5
for
101251638

.
osa-u.5
for
4334353

.
osa-u.5
for
4348435

.
zma-u.5
for
100275038

.
zma-u.5
for
100382564

.
zma-u.5
for
100274276

.
vvi-u.5
for
100242902

.
ppo-u.5
for
7480595

.
ppo-u.5
for
18107341

.
mtr-u.5
for
25495421

.


Ortholog ID: 3685
Species ath ath gma gma sly osa osa zma zma bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol AT5G15810 AT3G02320 LOC100800256 LOC100777825 LOC101251638 LOC4334353 LOC4348435 LOC100275038 LOC100274276 LOC103856163 LOC100242902 LOC7480595 LOC18107341 LOC25495421 LOC123187476 LOC123051549 LOC123424705 LOC123449027 LOC107892004 LOC107910492 LOC106424644 LOC106372181 CHLRE_10g422000v5 LOC8055064 LOC8084941 LOC102598925 LOC102602420 LOC102614460 LOC100832805 LOC100825731 LOC107760972 LOC107776095
Function* tRNA (guanine(26)-N(2))-dimethyltransferase N2,N2-dimethylguanosine tRNA methyltransferase probable tRNA (guanine(26)-N(2))-dimethyltransferase 2 probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 tRNA (guanine(26)-N(2))-dimethyltransferase 1 tRNA (guanine(26)-N(2))-dimethyltransferase 1 tRNA (guanine(26)-N(2))-dimethyltransferase 1 probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 uncharacterized LOC100274276 probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 tRNA (guanine(26)-N(2))-dimethyltransferase 2 probable tRNA (guanine(26)-N(2))-dimethyltransferase 2 probable tRNA (guanine(26)-N(2))-dimethyltransferase 2 probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 probable tRNA (guanine(26)-N(2))-dimethyltransferase 2 probable tRNA (guanine(26)-N(2))-dimethyltransferase 2 probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 uncharacterized protein probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 probable tRNA (guanine(26)-N(2))-dimethyltransferase 2 probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 tRNA (guanine(26)-N(2))-dimethyltransferase 1 tRNA (guanine(26)-N(2))-dimethyltransferase 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly03013 Nucleocytoplasmic transport 3
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04518 Integrin signaling 2
zma04120 Ubiquitin mediated proteolysis 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00450 Selenocompound metabolism 3
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 5
cre00250 Alanine, aspartate and glutamate metabolism 2
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 4
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00260 Glycine, serine and threonine metabolism 3
sot00470 D-Amino acid metabolism 3
sot00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00190 Oxidative phosphorylation 2
nta03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831438 820451 100800256 100777825 101251638 4334353 4348435 100275038 100274276 103856163 100242902 7480595 18107341 25495421 123187476 123051549 123424705 123449027 107892004 107910492 106424644 106372181 5728252 8055064 8084941 102598925 102602420 102614460 100832805 100825731 107760972 107776095
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