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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g182900v5   uncharacterized protein 
 ath-u.5   AT5G06660   transmembrane/coiled-coil protein (Protein of unknown function DUF106, transmembrane) 
 gma-u.5   100782593   transmembrane and coiled-coil domain-containing protein 1-like 
 gma-u.5   100499752   uncharacterized LOC100499752 
 sly-u.5   101257715   uncharacterized LOC101257715 
 osa-u.5   4333937   uncharacterized LOC4333937 
 zma-u.5   100382332   Transmembrane and coiled-coil domains protein 1 
 zma-u.5   100283298   fb27 
 vvi-u.5   100262250   uncharacterized LOC100262250 
 ppo-u.5   7488041   uncharacterized LOC7488041 
 mtr-u.5   11429146   calcium load-activated calcium channel 

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Top 50 coexpressed genes to CHLRE_03g182900v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g182900v5 (cre-r.1 coexpression data)

CoexMap"5728495"


creCHLRE_03g182900v5 | Entrez gene ID : 5728495      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032469 [list] [network] endoplasmic reticulum calcium ion homeostasis  (3 genes)  IEA  
GO CC
GO:0005789 [list] [network] endoplasmic reticulum membrane  (120 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (2907 genes)  IEA  
GO MF
GO:0005262 [list] [network] calcium channel activity  (29 genes)  IEA  
Protein XP_001702921.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  extr 2,  mito 1,  vacu 1,  E.R. 1,  pero 1,  E.R._vacu 1  (predict for XP_001702921.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_001702921.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g182900v5

.
ath-u.5
for
AT5G06660

.
gma-u.5
for
100782593

.
gma-u.5
for
100499752

.
sly-u.5
for
101257715

.
osa-u.5
for
4333937

.
zma-u.5
for
100382332

.
zma-u.5
for
100283298

.
vvi-u.5
for
100262250

.
ppo-u.5
for
7488041

.
mtr-u.5
for
11429146

.


Ortholog ID: 8934
Species ath gma gma sly osa zma zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G06660 LOC100782593 LOC100499752 LOC101257715 LOC4333937 LOC100382332 LOC100283298 LOC103845847 LOC100262250 LOC7488041 LOC11429146 LOC123095929 LOC123090900 LOC123447576 LOC107891247 LOC107889492 LOC106418496 LOC106358225 CHLRE_03g182900v5 LOC8063362 LOC102597373 LOC102618024 LOC100822805 LOC107759932 LOC107819946
Function* transmembrane/coiled-coil protein (Protein of unknown function DUF106, transmembrane) transmembrane and coiled-coil domain-containing protein 1-like uncharacterized LOC100499752 uncharacterized LOC101257715 uncharacterized LOC4333937 Transmembrane and coiled-coil domains protein 1 fb27 calcium load-activated calcium channel uncharacterized LOC100262250 uncharacterized LOC7488041 calcium load-activated calcium channel calcium load-activated calcium channel calcium load-activated calcium channel calcium load-activated calcium channel-like calcium load-activated calcium channel calcium load-activated calcium channel calcium load-activated calcium channel-like calcium load-activated calcium channel-like uncharacterized protein calcium load-activated calcium channel transmembrane and coiled-coil domains protein 1-like uncharacterized LOC102618024 calcium load-activated calcium channel uncharacterized LOC107759932 uncharacterized LOC107819946
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 5
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 8
osa00450 Selenocompound metabolism 2
osa03060 Protein export 2
osa04141 Protein processing in endoplasmic reticulum 2
osa04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 4
bra04016 MAPK signaling pathway - plant 3
bra04070 Phosphatidylinositol signaling system 3
bra04075 Plant hormone signal transduction 3
bra04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00510 N-Glycan biosynthesis 3
ppo00513 Various types of N-glycan biosynthesis 3
ppo04141 Protein processing in endoplasmic reticulum 3
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 2
tae04075 Plant hormone signal transduction 2
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
tae04626 Plant-pathogen interaction 3
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 5
hvu04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00340 Histidine metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 4
ghi00020 Citrate cycle (TCA cycle) 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 6
sot04142 Lysosome 4
sot04145 Phagosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00020 Citrate cycle (TCA cycle) 3
cit01200 Carbon metabolism 3
cit01210 2-Oxocarboxylic acid metabolism 3
cit01230 Biosynthesis of amino acids 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 5
nta04142 Lysosome 5
nta04145 Phagosome 5
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 5
nta04142 Lysosome 5
nta04145 Phagosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830554 100782593 100499752 101257715 4333937 100382332 100283298 103845847 100262250 7488041 11429146 123095929 123090900 123447576 107891247 107889492 106418496 106358225 5728495 8063362 102597373 102618024 100822805 107759932 107819946
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