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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g513254v5   uncharacterized protein 
 ath-u.5   SNM1   DNA repair metallo-beta-lactamase family protein 
 gma-u.5   100790844   DNA cross-link repair protein SNM1 
 osa-u.5   4335730   DNA cross-link repair protein SNM1 
 zma-u.5   100192920   uncharacterized LOC100192920 
 ppo-u.5   7466282   DNA cross-link repair protein SNM1 
 mtr-u.5   11439525   DNA cross-link repair protein SNM1 

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Top 50 coexpressed genes to CHLRE_12g513254v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g513254v5 (cre-r.1 coexpression data)

CoexMap"5728512"


creCHLRE_12g513254v5 | Entrez gene ID : 5728512      
Species cre ath gma osa zma ppo mtr sly sbi nta bra vvi cit hvu bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031848 [list] [network] protection from non-homologous end joining at telomere  (3 genes)  IEA  
GO:0036297 [list] [network] interstrand cross-link repair  (10 genes)  IEA  
GO:0006303 [list] [network] double-strand break repair via nonhomologous end joining  (11 genes)  IEA  
GO CC
GO MF
GO:0035312 [list] [network] 5'-3' DNA exonuclease activity  (4 genes)  IEA  
GO:0003684 [list] [network] damaged DNA binding  (27 genes)  IEA  
Protein XP_042918359.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 4  (predict for XP_042918359.1)
Subcellular
localization
TargetP
other 6  (predict for XP_042918359.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g513254v5

.
ath-u.5
for
SNM1

.
gma-u.5
for
100790844

.
osa-u.5
for
4335730

.
zma-u.5
for
100192920

.
ppo-u.5
for
7466282

.
mtr-u.5
for
11439525

.


Ortholog ID: 12201
Species ath gma osa zma bra ppo mtr tae tae hvu bna bna cre sbi sot cit bdi nta nta
Symbol SNM1 LOC100790844 LOC4335730 LOC100192920 LOC103875283 LOC7466282 LOC11439525 LOC123189110 LOC123045357 LOC123426598 LOC106349321 LOC106409662 CHLRE_12g513254v5 LOC8072056 LOC102587753 LOC102610837 LOC100832523 LOC107776827 LOC107814303
Function* DNA repair metallo-beta-lactamase family protein DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 uncharacterized LOC100192920 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 uncharacterized protein DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1-like DNA cross-link repair protein SNM1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 4
tae00670 One carbon pool by folate 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 3
tae00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 3
sot00240 Pyrimidine metabolism 3
sot00480 Glutathione metabolism 3
sot01232 Nucleotide metabolism 3
sot03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00380 Tryptophan metabolism 2
nta00901 Indole alkaloid biosynthesis 2
nta00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00073 Cutin, suberine and wax biosynthesis 2
nta00561 Glycerolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822280 100790844 4335730 100192920 103875283 7466282 11439525 123189110 123045357 123426598 106349321 106409662 5728512 8072056 102587753 102610837 100832523 107776827 107814303
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