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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g513701v5   uncharacterized protein 
 ath-u.5   AT1G77030   putative DEAD-box ATP-dependent RNA helicase 29 
 gma-u.5   121173656   putative DEAD-box ATP-dependent RNA helicase 29 
 gma-u.5   100806274   putative DEAD-box ATP-dependent RNA helicase 29 
 gma-u.5   100817417   putative DEAD-box ATP-dependent RNA helicase 29 
 sly-u.5   101246967   putative DEAD-box ATP-dependent RNA helicase 29 
 osa-u.5   4345577   DEAD-box ATP-dependent RNA helicase 29-like 
 zma-u.5   109946026   DEAD-box ATP-dependent RNA helicase 29 
 vvi-u.5   100257398   putative DEAD-box ATP-dependent RNA helicase 29 
 ppo-u.5   7491254   putative DEAD-box ATP-dependent RNA helicase 29 
 mtr-u.5   11442894   putative DEAD-box ATP-dependent RNA helicase 29 

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Top 50 coexpressed genes to CHLRE_12g513701v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g513701v5 (cre-r.1 coexpression data)

CoexMap"5728537"


creCHLRE_12g513701v5 | Entrez gene ID : 5728537    
Species cre ath gma sly osa zma vvi ppo mtr ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 1 1 3 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (44 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1223 genes)  IEA  
Protein XP_042918367.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 5,  cyto_nucl 5  (predict for XP_042918367.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042918367.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g513701v5

.
ath-u.5
for
AT1G77030

.
gma-u.5
for
121173656

.
gma-u.5
for
100806274

.
gma-u.5
for
100817417

.
sly-u.5
for
101246967

.
osa-u.5
for
4345577

.
zma-u.5
for
109946026

.
vvi-u.5
for
100257398

.
ppo-u.5
for
7491254

.
mtr-u.5
for
11442894

.


Ortholog ID: 9884
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G77030 LOC100817417 LOC100806274 LOC101246967 LOC4345577 LOC109946026 LOC103830575 LOC100257398 LOC7491254 LOC11442894 LOC123098971 LOC123105908 LOC123449850 LOC107910406 LOC107951466 LOC106353487 LOC106386031 CHLRE_12g513701v5 LOC8070083 LOC102582465 LOC102611059 LOC100841963 LOC107806579 LOC107779216
Function* putative DEAD-box ATP-dependent RNA helicase 29 putative DEAD-box ATP-dependent RNA helicase 29 putative DEAD-box ATP-dependent RNA helicase 29 putative DEAD-box ATP-dependent RNA helicase 29 DEAD-box ATP-dependent RNA helicase 29-like DEAD-box ATP-dependent RNA helicase 29 putative DEAD-box ATP-dependent RNA helicase 29 putative DEAD-box ATP-dependent RNA helicase 29 putative DEAD-box ATP-dependent RNA helicase 29 putative DEAD-box ATP-dependent RNA helicase 29 DEAD-box ATP-dependent RNA helicase 29 DEAD-box ATP-dependent RNA helicase 29 DEAD-box ATP-dependent RNA helicase 29 putative DEAD-box ATP-dependent RNA helicase 29 putative DEAD-box ATP-dependent RNA helicase 29 putative DEAD-box ATP-dependent RNA helicase 29 putative DEAD-box ATP-dependent RNA helicase 29 uncharacterized protein DEAD-box ATP-dependent RNA helicase 29 putative DEAD-box ATP-dependent RNA helicase 29 putative DEAD-box ATP-dependent RNA helicase 29 DEAD-box ATP-dependent RNA helicase 29 putative DEAD-box ATP-dependent RNA helicase 29 putative DEAD-box ATP-dependent RNA helicase 29
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 7
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
vvi03040 Spliceosome 3
vvi03013 Nucleocytoplasmic transport 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03020 RNA polymerase 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
ghi00920 Sulfur metabolism 3
ghi01320 Sulfur cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
sbi03018 RNA degradation 2
sbi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 10
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844039 100817417 100806274 101246967 4345577 109946026 103830575 100257398 7491254 11442894 123098971 123105908 123449850 107910406 107951466 106353487 106386031 5728537 8070083 102582465 102611059 100841963 107806579 107779216
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