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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g556228v5   uncharacterized protein 
 ath-u.5   AT3G44190   FAD/NAD(P)-binding oxidoreductase family protein 
 ath-u.5   AT5G22140   FAD/NAD(P)-binding oxidoreductase family protein 
 gma-u.5   100813439   apoptosis-inducing factor homolog A 
 gma-u.5   100813980   apoptosis-inducing factor homolog A-like 
 gma-u.5   100817682   apoptosis-inducing factor homolog A 
 sly-u.5   101260291   uncharacterized LOC101260291 
 sly-u.5   101263577   uncharacterized LOC101263577 
 sly-u.5   101257735   uncharacterized LOC101257735 
 osa-u.5   4328310   uncharacterized LOC4328310 
 zma-u.5   100282462   disulfide oxidoreductase/ electron carrier/ oxidoreductase 
 zma-u.5   103637499   apoptosis-inducing factor homolog A 
 vvi-u.5   100241104   uncharacterized LOC100241104 
 vvi-u.5   100263525   uncharacterized LOC100263525 
 ppo-u.5   7478498   uncharacterized LOC7478498 
 mtr-u.5   25492217   apoptosis-inducing factor homolog A 
 mtr-u.5   25492213   apoptosis-inducing factor homolog A 

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Top 50 coexpressed genes to CHLRE_12g556228v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g556228v5 (cre-r.1 coexpression data)

CoexMap"5728595"


creCHLRE_12g556228v5 | Entrez gene ID : 5728595      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 2 3 3 1 2 2 1 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (2907 genes)  IEA  
GO MF
GO:0004174 [list] [network] electron-transferring-flavoprotein dehydrogenase activity  (3 genes)  IEA  
GO:0050660 [list] [network] flavin adenine dinucleotide binding  (95 genes)  IEA  
Protein XP_001703056.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  cyto 1,  pero 1,  cyto_pero 1  (predict for XP_001703056.1)
Subcellular
localization
TargetP
other 2  (predict for XP_001703056.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g556228v5

.
ath-u.5
for
AT3G44190

.
ath-u.5
for
AT5G22140

.
gma-u.5
for
100813439

.
gma-u.5
for
100813980

.
gma-u.5
for
100817682

.
sly-u.5
for
101260291

.
sly-u.5
for
101263577

.
sly-u.5
for
101257735

.
osa-u.5
for
4328310

.
zma-u.5
for
100282462

.
zma-u.5
for
103637499

.
vvi-u.5
for
100241104

.
vvi-u.5
for
100263525

.
ppo-u.5
for
7478498

.
mtr-u.5
for
25492217

.
mtr-u.5
for
25492213

.


Ortholog ID: 2345
Species ath ath gma gma sly sly osa zma bra bra vvi vvi ppo mtr mtr tae tae hvu bna bna cre cre sbi sot bdi nta nta
Symbol AT5G22140 AT3G44190 LOC100817682 LOC100818210 LOC101260291 LOC101257735 LOC4328310 LOC100282462 LOC103856502 LOC103848061 LOC100263525 LOC100241104 LOC7478498 LOC25492213 LOC25492217 LOC123136311 LOC123099706 LOC123403180 LOC106425612 LOC106419778 CHLRE_12g555803v5 CHLRE_12g556228v5 LOC8074639 LOC102580841 LOC100843081 LOC107793422 LOC107827516
Function* FAD/NAD(P)-binding oxidoreductase family protein FAD/NAD(P)-binding oxidoreductase family protein apoptosis-inducing factor homolog A apoptosis-inducing factor homolog A uncharacterized LOC101260291 uncharacterized LOC101257735 uncharacterized LOC4328310 disulfide oxidoreductase/ electron carrier/ oxidoreductase apoptosis-inducing factor 2 apoptosis-inducing factor 2 uncharacterized LOC100263525 uncharacterized LOC100241104 uncharacterized LOC7478498 apoptosis-inducing factor homolog A apoptosis-inducing factor homolog A apoptosis-inducing factor homolog B ferroptosis suppressor protein 1 apoptosis-inducing factor homolog B-like ferroptosis suppressor protein 1 ferroptosis suppressor protein 1 uncharacterized protein uncharacterized protein apoptosis-inducing factor homolog B apoptosis-inducing factor homolog B-like apoptosis-inducing factor homolog B uncharacterized LOC107793422 uncharacterized LOC107827516
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 4
sly00010 Glycolysis / Gluconeogenesis 2
sly00020 Citrate cycle (TCA cycle) 2
sly00620 Pyruvate metabolism 2
sly00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 7
osa01200 Carbon metabolism 3
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00480 Glutathione metabolism 2
mtr00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 2
tae04070 Phosphatidylinositol signaling system 2
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 3
hvu04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 2
bna04075 Plant hormone signal transduction 2
bna00561 Glycerolipid metabolism 2
bna00564 Glycerophospholipid metabolism 2
bna04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00999 Biosynthesis of various plant secondary metabolites 4
bna00020 Citrate cycle (TCA cycle) 2
bna00270 Cysteine and methionine metabolism 2
bna00566 Sulfoquinovose metabolism 2
bna00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
cre01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 3
sbi01212 Fatty acid metabolism 2
sbi04146 Peroxisome 2
sbi00010 Glycolysis / Gluconeogenesis 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
sot03040 Spliceosome 2
sot04141 Protein processing in endoplasmic reticulum 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00905 Brassinosteroid biosynthesis 3
nta04130 SNARE interactions in vesicular transport 2
nta04626 Plant-pathogen interaction 2
nta04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832275 823541 100817682 100818210 101260291 101257735 4328310 100282462 103856502 103848061 100263525 100241104 7478498 25492213 25492217 123136311 123099706 123403180 106425612 106419778 5728578 5728595 8074639 102580841 100843081 107793422 107827516
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