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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g174750v5   uncharacterized protein 
 ath-u.5   AT1G74070   Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 
 gma-u.5   CYP58   peptidyl-prolyl cis-trans isomerase CYP58 
 gma-u.5   CYP47   peptidyl-prolyl cis-trans isomerase CYP47 
 sly-u.5   101257251   peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic 
 osa-u.5   4326140   peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic 
 zma-u.5   103634744   peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic 
 vvi-u.5   100254249   peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic 
 mtr-u.5   11438100   peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic 

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Top 50 coexpressed genes to CHLRE_03g174750v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g174750v5 (cre-r.1 coexpression data)

CoexMap"5728876"


creCHLRE_03g174750v5 | Entrez gene ID : 5728876      
Species cre ath gma sly osa zma vvi mtr sbi nta bra hvu cit bdi ppo sot tae bna ghi
Paralog 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000413 [list] [network] protein peptidyl-prolyl isomerization  (33 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (224 genes)  IEA  
GO MF
GO:0003755 [list] [network] peptidyl-prolyl cis-trans isomerase activity  (57 genes)  IEA  
Protein XP_001703283.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_001703283.1)
Subcellular
localization
TargetP
chlo 7,  mito 4  (predict for XP_001703283.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g174750v5

.
ath-u.5
for
AT1G74070

.
gma-u.5
for
CYP58

.
gma-u.5
for
CYP47

.
sly-u.5
for
101257251

.
osa-u.5
for
4326140

.
zma-u.5
for
103634744

.
vvi-u.5
for
100254249

.
mtr-u.5
for
11438100

.


Ortholog ID: 10553
Species ath gma gma sly osa zma bra vvi mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G74070 CYP58 CYP47 LOC101257251 LOC4326140 LOC103634744 LOC103852879 LOC100254249 LOC11438100 LOC123073576 LOC123057458 LOC123439109 LOC107949649 LOC107886218 LOC106381364 LOC106416296 CHLRE_03g174750v5 LOC8070454 LOC102581487 LOC102621093 LOC100846290 LOC107793233 LOC107806339
Function* Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein peptidyl-prolyl cis-trans isomerase CYP58 peptidyl-prolyl cis-trans isomerase CYP47 peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic-like uncharacterized protein peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 3
ath01230 Biosynthesis of amino acids 3
ath00195 Photosynthesis 2
ath00010 Glycolysis / Gluconeogenesis 2
ath00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 4
gma00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma00260 Glycine, serine and threonine metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 3
sly00196 Photosynthesis - antenna proteins 3
sly00190 Oxidative phosphorylation 2
sly01200 Carbon metabolism 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
osa00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 6
zma00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 8
vvi00860 Porphyrin metabolism 4
vvi01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
mtr00710 Carbon fixation by Calvin cycle 2
mtr01200 Carbon metabolism 2
mtr00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 10
tae01200 Carbon metabolism 10
tae00010 Glycolysis / Gluconeogenesis 4
tae00030 Pentose phosphate pathway 4
tae00051 Fructose and mannose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00710 Carbon fixation by Calvin cycle 9
hvu01200 Carbon metabolism 9
hvu00630 Glyoxylate and dicarboxylate metabolism 8
hvu00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00710 Carbon fixation by Calvin cycle 4
ghi01200 Carbon metabolism 4
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00710 Carbon fixation by Calvin cycle 4
ghi01200 Carbon metabolism 4
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 11
sbi00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 6
sot00710 Carbon fixation by Calvin cycle 5
sot00030 Pentose phosphate pathway 2
sot01230 Biosynthesis of amino acids 2
sot00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 3
cit00040 Pentose and glucuronate interconversions 2
cit00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00196 Photosynthesis - antenna proteins 5
nta00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00196 Photosynthesis - antenna proteins 4
nta00195 Photosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843747 100796313 100800469 101257251 4326140 103634744 103852879 100254249 11438100 123073576 123057458 123439109 107949649 107886218 106381364 106416296 5728876 8070454 102581487 102621093 100846290 107793233 107806339
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