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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_50g761397v5   uncharacterized protein 
 ath-u.5   AT1G09150   pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein 
 gma-u.5   100799910   malignant T-cell-amplified sequence 1 homolog 
 gma-u.5   100305623   uncharacterized LOC100305623 
 sly-u.5   101244722   uncharacterized LOC101244722 
 osa-u.5   4327290   uncharacterized LOC4327290 
 zma-u.5   100281351   ligatin 
 vvi-u.5   100259659   uncharacterized LOC100259659 
 ppo-u.5   18098648   uncharacterized LOC18098648 
 ppo-u.5   7481718   uncharacterized LOC7481718 
 mtr-u.5   11415367   malignant T-cell-amplified sequence 1 

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Top 50 coexpressed genes to CHLRE_50g761397v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_50g761397v5 (cre-r.1 coexpression data)

CoexMap"5728980"


creCHLRE_50g761397v5 | Entrez gene ID : 5728980      
Species cre ath gma sly osa zma vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi sbi
Paralog 1 1 2 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0001731 [list] [network] formation of translation preinitiation complex  (7 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
Protein XP_042914005.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  mito 1,  E.R. 1,  golg 1,  chlo_mito 1,  cyto_mito 1,  cysk_nucl 1,  mito_plas 1  (predict for XP_042914005.1)
Subcellular
localization
TargetP
other 6  (predict for XP_042914005.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_50g761397v5

.
ath-u.5
for
AT1G09150

.
gma-u.5
for
100799910

.
gma-u.5
for
100305623

.
sly-u.5
for
101244722

.
osa-u.5
for
4327290

.
zma-u.5
for
100281351

.
vvi-u.5
for
100259659

.
ppo-u.5
for
18098648

.
ppo-u.5
for
7481718

.
mtr-u.5
for
11415367

.


Ortholog ID: 7786
Species ath gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G09150 LOC100799910 LOC100305623 LOC101244722 LOC4327290 LOC100281351 LOC103871644 LOC103836357 LOC100259659 LOC7481718 LOC18098648 LOC11415367 LOC123072797 LOC123063641 LOC123445662 LOC107887316 LOC107927270 LOC106351185 LOC106454378 CHLRE_50g761397v5 LOC8079631 LOC102585232 LOC102626962 LOC100837868 LOC107759207 LOC107829156
Function* pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein malignant T-cell-amplified sequence 1 homolog uncharacterized LOC100305623 uncharacterized LOC101244722 uncharacterized LOC4327290 ligatin malignant T-cell-amplified sequence 1 homolog malignant T-cell-amplified sequence 1 homolog uncharacterized LOC100259659 uncharacterized LOC7481718 uncharacterized LOC18098648 malignant T-cell-amplified sequence 1 malignant T-cell-amplified sequence 1 homolog malignant T-cell-amplified sequence 1 homolog malignant T-cell-amplified sequence 1 homolog malignant T-cell-amplified sequence 1 homolog malignant T-cell-amplified sequence 1 homolog malignant T-cell-amplified sequence 1 homolog malignant T-cell-amplified sequence 1-A-like uncharacterized protein malignant T-cell-amplified sequence 1 homolog malignant T-cell-amplified sequence 1 homolog uncharacterized LOC102626962 malignant T-cell-amplified sequence 1 homolog uncharacterized LOC107759207 uncharacterized LOC107829156
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03010 Ribosome 2
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03010 Ribosome 4
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03010 Ribosome 3
gma03050 Proteasome 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
bra03040 Spliceosome 3
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 7
vvi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 5
ppo04145 Phagosome 3
ppo00190 Oxidative phosphorylation 3
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 6
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00230 Purine metabolism 3
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00051 Fructose and mannose metabolism 2
ghi00562 Inositol phosphate metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00051 Fructose and mannose metabolism 2
ghi00562 Inositol phosphate metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 3
bna03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 3
bna03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 7
cre03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 2
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot00190 Oxidative phosphorylation 4
sot04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 3
bdi03060 Protein export 2
bdi03010 Ribosome 2
bdi03018 RNA degradation 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 6
nta03008 Ribosome biogenesis in eukaryotes 4
nta03250 Viral life cycle - HIV-1 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837434 100799910 100305623 101244722 4327290 100281351 103871644 103836357 100259659 7481718 18098648 11415367 123072797 123063641 123445662 107887316 107927270 106351185 106454378 5728980 8079631 102585232 102626962 100837868 107759207 107829156
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