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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_17g745347v5   uncharacterized protein 
 ath-u.5   AT3G14740   RING/FYVE/PHD zinc finger superfamily protein 
 gma-u.5   100802652   protein Jade-1 
 gma-u.5   100786929   protein Jade-1 
 sly-u.5   101251493   uncharacterized LOC101251493 
 osa-u.5   9271558   uncharacterized LOC9271558 
 zma-u.5   103649660   bromodomain-containing protein 1 
 ppo-u.5   7459140   uncharacterized LOC7459140 
 mtr-u.5   25501112   protein AF-10 

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Top 50 coexpressed genes to CHLRE_17g745347v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_17g745347v5 (cre-r.1 coexpression data)

CoexMap"5729151"


creCHLRE_17g745347v5 | Entrez gene ID : 5729151    
Species cre ath gma sly osa zma ppo mtr sbi nta bra vvi cit hvu bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (190 genes)  IEA  
GO CC
GO MF
Protein XP_042915193.1 [sequence] [blastp]
XP_042915194.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 3,  cysk_nucl 3,  nucl_plas 3  (predict for XP_042915193.1)
nucl 6,  mito 3,  cysk_nucl 3,  nucl_plas 3  (predict for XP_042915194.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042915193.1)
other 8  (predict for XP_042915194.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_17g745347v5

.
ath-u.5
for
AT3G14740

.
gma-u.5
for
100802652

.
gma-u.5
for
100786929

.
sly-u.5
for
101251493

.
osa-u.5
for
9271558

.
zma-u.5
for
103649660

.
ppo-u.5
for
7459140

.
mtr-u.5
for
25501112

.


Ortholog ID: 7208
Species ath gma gma sly osa zma bra ppo mtr tae tae hvu ghi ghi cre cre sbi sot bdi nta nta
Symbol AT3G14740 LOC100802652 LOC100786929 LOC101251493 LOC9271558 LOC103649660 LOC103869999 LOC7459140 LOC25501112 LOC123068958 LOC123077488 LOC123442944 LOC107904019 LOC121227959 CHLRE_17g745347v5 CHLRE_14g614151v5 LOC8078757 LOC102590417 LOC100830918 LOC107775824 LOC107775943
Function* RING/FYVE/PHD zinc finger superfamily protein protein Jade-1 protein Jade-1 uncharacterized LOC101251493 uncharacterized LOC9271558 bromodomain-containing protein 1 protein Jade-1 uncharacterized LOC7459140 protein AF-10 phosphatase and actin regulator 4A formin-like protein 3 anillin histone H3-lysine(4) N-trimethyltransferase ATX1 histone H3-lysine(4) N-trimethyltransferase ATX1 uncharacterized protein uncharacterized protein bromodomain-containing protein 1 protein Jade-1 lysine-specific demethylase 4B uncharacterized LOC107775824 uncharacterized LOC107775943
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 3
ath03440 Homologous recombination 3
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
ath03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 4
gma01232 Nucleotide metabolism 4
gma03030 DNA replication 3
gma03440 Homologous recombination 3
gma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 4
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
gma03440 Homologous recombination 2
gma00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 2
sly03440 Homologous recombination 2
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 3
zma00230 Purine metabolism 2
zma00240 Pyrimidine metabolism 2
zma00480 Glutathione metabolism 2
zma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 5
bra03420 Nucleotide excision repair 4
bra03440 Homologous recombination 4
bra03430 Mismatch repair 3
bra03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 11
ppo03420 Nucleotide excision repair 4
ppo00230 Purine metabolism 3
ppo00240 Pyrimidine metabolism 3
ppo00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 4
mtr03420 Nucleotide excision repair 2
mtr03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 8
tae03420 Nucleotide excision repair 4
tae03430 Mismatch repair 4
tae03440 Homologous recombination 4
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 5
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi00240 Pyrimidine metabolism 4
ghi00480 Glutathione metabolism 4
ghi01232 Nucleotide metabolism 4
ghi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi00240 Pyrimidine metabolism 4
ghi00480 Glutathione metabolism 4
ghi01232 Nucleotide metabolism 4
ghi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00270 Cysteine and methionine metabolism 2
sbi03030 DNA replication 2
sbi03420 Nucleotide excision repair 2
sbi03430 Mismatch repair 2
sbi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00240 Pyrimidine metabolism 2
sot01232 Nucleotide metabolism 2
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 5
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
nta00310 Lysine degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820702 100802652 100786929 101251493 9271558 103649660 103869999 7459140 25501112 123068958 123077488 123442944 107904019 121227959 5729151 5724597 8078757 102590417 100830918 107775824 107775943
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