ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT1G14060	GCK domain-containing protein
bra-r.6	103836086	uncharacterized LOC103836086
bna-r.1	106382337	uncharacterized LOC106382337
ghi-r.1	107935627	uncharacterized LOC107935627
ghi-r.1	107935623	uncharacterized LOC107935623
ghi-r.1	107886600	neurofilament medium polypeptide
cit-r.1	102630260	hypothetical protein
gma-u.5	100527346	GCK domain-containing protein
vvi-u.5	100257445	uncharacterized LOC100257445
ppo-u.5	18108472	uncharacterized LOC18108472
ppo-u.5	18104356	uncharacterized LOC18104356
ppo-u.5	18104421	uncharacterized LOC18104421
mtr-u.5	25492965	neurofilament medium polypeptide
sly-u.5	104646747	uncharacterized LOC104646747
sot-r.1	102588242	transcription elongation factor SPT5-like
sot-r.1	102590837	uncharacterized LOC102590837
nta-r.1	107778200	uncharacterized LOC107778200
osa-u.5	4333573	uncharacterized LOC4333573
osa-u.5	4342439	uncharacterized LOC4342439
zma-u.5	103631950	uncharacterized LOC103631950
zma-u.5	100277525	uncharacterized LOC100277525
tae-r.2	123052844	uncharacterized LOC123052844
tae-r.2	123104900	glutaconyl-CoA decarboxylase subunit gamma
tae-r.2	123116913	cytochrome c1
hvu-r.1	123398189	uncharacterized LOC123398189
sbi-r.1	8062206	myristoylated alanine-rich C-kinase substrate
sbi-r.1	8081136	translation initiation factor IF-2
bdi-r.1	100839268	uncharacterized LOC100839268
bdi-r.1	100833459	uncharacterized LOC100833459
cre-r.1	CHLRE_14g619950v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

ISM

GO MF

Protein

NP_001117281.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, mito 1, plas 1, extr 1, cysk 1, cysk_plas 1, mito_plas 1

(predict for NP_001117281.1)

Subcellular
localization
TargetP

other 8

(predict for NP_001117281.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT1G14060	bra-r.6 for 103836086	bna-r.1 for 106382337	ghi-r.1 for 107935627	ghi-r.1 for 107935623	ghi-r.1 for 107886600	cit-r.1 for 102630260	gma-u.5 for 100527346	vvi-u.5 for 100257445	ppo-u.5 for 18108472	ppo-u.5 for 18104356	ppo-u.5 for 18104421	mtr-u.5 for 25492965	sly-u.5 for 104646747	sot-r.1 for 102588242	sot-r.1 for 102590837	nta-r.1 for 107778200	osa-u.5 for 4333573	osa-u.5 for 4342439	zma-u.5 for 103631950	zma-u.5 for 100277525	tae-r.2 for 123052844	tae-r.2 for 123104900	tae-r.2 for 123116913	hvu-r.1 for 123398189	sbi-r.1 for 8062206	sbi-r.1 for 8081136	bdi-r.1 for 100839268	bdi-r.1 for 100833459	cre-r.1 for CHLRE_14g619950v5

Ortholog

Ortholog ID: 4784

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

GCK domain-containing protein

uncharacterized LOC103836086

uncharacterized LOC106382337

uncharacterized LOC107935627

uncharacterized LOC107935623

neurofilament medium polypeptide

hypothetical protein

GCK domain-containing protein

uncharacterized LOC100257445

uncharacterized LOC18108472

uncharacterized LOC18104356

uncharacterized LOC18104421

neurofilament medium polypeptide

uncharacterized LOC104646747

transcription elongation factor SPT5-like

uncharacterized LOC102590837

uncharacterized LOC107778200

uncharacterized LOC4333573

uncharacterized LOC4342439

uncharacterized LOC103631950

uncharacterized LOC100277525

uncharacterized LOC123052844

cytochrome c1

nuclear receptor corepressor 2

uncharacterized LOC123398189

myristoylated alanine-rich C-kinase substrate

translation initiation factor IF-2

uncharacterized LOC100839268

uncharacterized LOC100833459

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	7
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04626	Plant-pathogen interaction	4
bna03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	4
ghi03008	Ribosome biogenesis in eukaryotes	4
ghi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	4
ghi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	4
ghi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	4
gma03010	Ribosome	3
gma03040	Spliceosome	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	3
vvi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	3
ppo03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	3
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	5
sly03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	4
osa03050	Proteasome	3
osa03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	3
hvu03010	Ribosome	3
hvu00010	Glycolysis / Gluconeogenesis	2
hvu00710	Carbon fixation by Calvin cycle	2
hvu01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	3

Expression

Expression pattern

Entrez Gene ID^*

837966

103836086

106382337

107935627

107935623

107886600

102630260

100527346

100257445

18108472

18104356

18104421

25492965

104646747

102588242

102590837

107778200

4333573

4342439

103631950

100277525

123052844

123116913

123122714

123398189

8062206

8081136

100839268

100833459

5715881

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT1G14060 (ath-u.5 coexpression data)

Top 50 enrichment test to AT1G14060 (ath-u.5 coexpression data)


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	1	1	1	3	1	1	1	3	1	1	2	1	2	2	3	1	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT1G14060 (ath-u.5 coexpression data)

Top 50 enrichment test to AT1G14060 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**