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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g063632v5   uncharacterized protein 
 ath-u.5   OGG1   8-oxoguanine-DNA glycosylase 1 
 gma-u.5   100789749   N-glycosylase/DNA lyase OGG1 
 sly-u.5   101268340   N-glycosylase/DNA lyase OGG1 
 osa-u.5   4329639   MDIS1-interacting receptor like kinase 2 
 zma-u.5   100273912   N-glycosylase/DNA lyase OGG1 
 vvi-u.5   100264280   N-glycosylase/DNA lyase OGG1 
 ppo-u.5   7469168   N-glycosylase/DNA lyase OGG1 
 mtr-u.5   11411506   N-glycosylase/DNA lyase OGG1 

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Top 50 coexpressed genes to CHLRE_01g063632v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g063632v5 (cre-r.1 coexpression data)

CoexMap"66052208"


creCHLRE_01g063632v5 | Entrez gene ID : 66052208    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03410 [list] [network] Base excision repair (25 genes)
GO BP
GO:0006285 [list] [network] base-excision repair, AP site formation  (5 genes)  IEA  
GO:0006284 [list] [network] base-excision repair  (17 genes)  IEA  
GO:0006289 [list] [network] nucleotide-excision repair  (28 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0034039 [list] [network] 8-oxo-7,8-dihydroguanine DNA N-glycosylase activity  (2 genes)  IEA  
GO:0003684 [list] [network] damaged DNA binding  (27 genes)  IEA  
Protein XP_042928986.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 3  (predict for XP_042928986.1)
Subcellular
localization
TargetP
chlo 7,  other 3  (predict for XP_042928986.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g063632v5

.
ath-u.5
for
OGG1

.
gma-u.5
for
100789749

.
sly-u.5
for
101268340

.
osa-u.5
for
4329639

.
zma-u.5
for
100273912

.
vvi-u.5
for
100264280

.
ppo-u.5
for
7469168

.
mtr-u.5
for
11411506

.


Ortholog ID: 11478
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta
Symbol OGG1 LOC100789749 LOC101268340 LOC4329639 LOC100273912 LOC103873014 LOC100264280 LOC7469168 LOC11411506 LOC123077162 LOC123060153 LOC123442698 LOC121229513 LOC107940555 LOC106350091 LOC106402204 CHLRE_01g063632v5 LOC8064259 LOC102585160 LOC102614909 LOC100836671 LOC107760687
Function* 8-oxoguanine-DNA glycosylase 1 N-glycosylase/DNA lyase OGG1 N-glycosylase/DNA lyase OGG1 MDIS1-interacting receptor like kinase 2 N-glycosylase/DNA lyase OGG1 N-glycosylase/DNA lyase OGG1 N-glycosylase/DNA lyase OGG1 N-glycosylase/DNA lyase OGG1 N-glycosylase/DNA lyase OGG1 N-glycosylase/DNA lyase OGG1 N-glycosylase/DNA lyase OGG1 N-glycosylase/DNA lyase OGG1 N-glycosylase/DNA lyase OGG1 N-glycosylase/DNA lyase OGG1 N-glycosylase/DNA lyase OGG1 N-glycosylase/DNA lyase OGG1 uncharacterized protein N-glycosylase/DNA lyase OGG1 N-glycosylase/DNA lyase OGG1 N-glycosylase/DNA lyase OGG1 N-glycosylase/DNA lyase OGG1 N-glycosylase/DNA lyase OGG1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 2
ath03008 Ribosome biogenesis in eukaryotes 2
ath04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00785 Lipoic acid metabolism 2
ppo01240 Biosynthesis of cofactors 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
tae04075 Plant hormone signal transduction 3
tae04626 Plant-pathogen interaction 3
tae03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
tae03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03410 Base excision repair 3
hvu00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 4
ghi03060 Protein export 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi03018 RNA degradation 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 3
sbi04070 Phosphatidylinositol signaling system 3
sbi04075 Plant hormone signal transduction 3
sbi04626 Plant-pathogen interaction 3
sbi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00240 Pyrimidine metabolism 2
cit01240 Biosynthesis of cofactors 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 3
nta04070 Phosphatidylinositol signaling system 3
nta00650 Butanoate metabolism 2
nta03083 Polycomb repressive complex 2
nta00052 Galactose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838775 100789749 101268340 4329639 100273912 103873014 100264280 7469168 11411506 123077162 123060153 123442698 121229513 107940555 106350091 106402204 66052208 8064259 102585160 102614909 100836671 107760687
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