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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_04g214690v5   uncharacterized protein 
 ath-u.5   POP1   ribonuclease Ps 
 gma-u.5   100798058   uncharacterized LOC100798058 
 gma-u.5   100788705   uncharacterized LOC100788705 
 sly-u.5   101252549   ribonucleases P/MRP protein subunit POP1 
 osa-u.5   4351115   ribonucleases P/MRP protein subunit POP1 
 zma-u.5   103633590   ribonucleases P/MRP protein subunit POP1 
 vvi-u.5   100854265   ribonucleases P/MRP protein subunit POP1 
 vvi-u.5   100249005   ribonucleases P/MRP protein subunit POP1 
 ppo-u.5   7460471   ribonucleases P/MRP protein subunit POP1 
 mtr-u.5   25491287   ribonucleases P/MRP protein subunit POP1 

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Top 50 coexpressed genes to CHLRE_04g214690v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_04g214690v5 (cre-r.1 coexpression data)

CoexMap"66053131"


creCHLRE_04g214690v5 | Entrez gene ID : 66053131    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0001682 [list] [network] tRNA 5'-leader removal  (5 genes)  IEA  
GO CC
GO:0005655 [list] [network] nucleolar ribonuclease P complex  (2 genes)  IEA  
GO:0000172 [list] [network] ribonuclease MRP complex  (3 genes)  IEA  
GO MF
Protein XP_042925116.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_042925116.1)
Subcellular
localization
TargetP
other 6  (predict for XP_042925116.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_04g214690v5

.
ath-u.5
for
POP1

.
gma-u.5
for
100798058

.
gma-u.5
for
100788705

.
sly-u.5
for
101252549

.
osa-u.5
for
4351115

.
zma-u.5
for
103633590

.
vvi-u.5
for
100854265

.
vvi-u.5
for
100249005

.
ppo-u.5
for
7460471

.
mtr-u.5
for
25491287

.


Ortholog ID: 7192
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot bdi nta nta
Symbol POP1 LOC100798058 LOC101252549 LOC4351115 LOC103633590 LOC103863563 LOC100263441 LOC7460471 LOC25491287 LOC123096835 LOC123086226 LOC123448377 LOC107922772 LOC107912311 LOC106445792 LOC106390774 CHLRE_04g214690v5 LOC8077505 LOC102587217 LOC100822676 LOC107812658 LOC107817298
Function* ribonuclease Ps uncharacterized LOC100798058 ribonucleases P/MRP protein subunit POP1 ribonucleases P/MRP protein subunit POP1 ribonucleases P/MRP protein subunit POP1 ribonucleases P/MRP protein subunit POP1 ribonucleases P/MRP protein subunit POP1 ribonucleases P/MRP protein subunit POP1 ribonucleases P/MRP protein subunit POP1 ribonucleases P/MRP protein subunit POP1 ribonucleases P/MRP protein subunit POP1 ribonucleases P/MRP protein subunit POP1 ribonucleases P/MRP protein subunit POP1 ribonucleases P/MRP protein subunit POP1 ribonucleases P/MRP protein subunit POP1-like ribonucleases P/MRP protein subunit POP1 uncharacterized protein uncharacterized LOC8077505 uncharacterized LOC102587217 ribonucleases P/MRP protein subunit POP1 ribonucleases P/MRP protein subunit POP1 ribonucleases P/MRP protein subunit POP1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 4
osa03030 DNA replication 2
osa03410 Base excision repair 2
osa03420 Nucleotide excision repair 2
osa03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 8
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 8
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03083 Polycomb repressive complex 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03083 Polycomb repressive complex 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 4
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi00230 Purine metabolism 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 8
sot03020 RNA polymerase 2
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
nta03013 Nucleocytoplasmic transport 2
nta03250 Viral life cycle - HIV-1 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
nta03013 Nucleocytoplasmic transport 2
nta03250 Viral life cycle - HIV-1 2
nta00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819343 100798058 101252549 4351115 103633590 103863563 100263441 7460471 25491287 123096835 123086226 123448377 107922772 107912311 106445792 106390774 66053131 8077505 102587217 100822676 107812658 107817298
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