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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g264400v5   uncharacterized protein 
 ath-u.5   AT3G52250   Duplicated homeodomain-like superfamily protein 
 gma-u.5   100810588   uncharacterized LOC100810588 
 gma-u.5   100806246   uncharacterized LOC100806246 
 sly-u.5   101263808   uncharacterized LOC101263808 
 osa-u.5   9268524   uncharacterized LOC9268524 
 zma-u.5   118476428   proline-rich protein 7-like 
 zma-u.5   100279451   uncharacterized LOC100279451 
 zma-u.5   100384382   uncharacterized LOC100384382 
 bra-r.6   103860750   uncharacterized LOC103860750 
 bra-r.6   103841164   uncharacterized LOC103841164 
 vvi-u.5   100240985   uncharacterized LOC100240985 
 ppo-u.5   7468404   uncharacterized LOC7468404 
 ppo-u.5   7479891   uncharacterized LOC7479891 
 mtr-u.5   11405402   uncharacterized LOC11405402 
 mtr-u.5   25495914   uncharacterized LOC25495914 
 tae-r.2   123180251   uncharacterized LOC123180251 
 tae-r.2   123108621   uncharacterized LOC123108621 
 ghi-r.1   107915891   uncharacterized LOC107915891 
 ghi-r.1   107913477   uncharacterized LOC107913477 
 ghi-r.1   107934192   uncharacterized LOC107934192 
 bna-r.1   106414560   uncharacterized LOC106414560 
 bna-r.1   106409513   uncharacterized LOC106409513 
 bna-r.1   106367835   uncharacterized LOC106367835 
 sbi-r.1   8071259   uncharacterized LOC8071259 
 sot-r.1   102602320   uncharacterized LOC102602320 
 cit-r.1   102608361   uncharacterized LOC102608361 
 bdi-r.1   100825285   uncharacterized LOC100825285 
 nta-r.1   107814661   uncharacterized LOC107814661 
 nta-r.1   107806392   uncharacterized LOC107806392 

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Top 50 coexpressed genes to CHLRE_06g264400v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g264400v5 (cre-r.1 coexpression data)

CoexMap"66053626"


creCHLRE_06g264400v5 | Entrez gene ID : 66053626    
Species cre ath gma sly osa zma bra vvi ppo mtr tae ghi bna sbi sot cit bdi nta hvu
Paralog 1 1 2 1 1 3 2 1 2 2 2 3 3 1 1 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (190 genes)  IEA  
GO CC
GO MF
Protein XP_042923549.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 3,  cyto_nucl 3  (predict for XP_042923549.1)
Subcellular
localization
TargetP
other 6  (predict for XP_042923549.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g264400v5
ath-u.5
for
AT3G52250
gma-u.5
for
100810588
gma-u.5
for
100806246
sly-u.5
for
101263808
osa-u.5
for
9268524
zma-u.5
for
118476428
zma-u.5
for
100279451
zma-u.5
for
100384382
bra-r.6
for
103860750
bra-r.6
for
103841164
vvi-u.5
for
100240985
ppo-u.5
for
7468404
ppo-u.5
for
7479891
mtr-u.5
for
11405402
mtr-u.5
for
25495914
tae-r.2
for
123180251
tae-r.2
for
123108621
ghi-r.1
for
107915891
ghi-r.1
for
107913477
ghi-r.1
for
107934192
bna-r.1
for
106414560
bna-r.1
for
106409513
bna-r.1
for
106367835
sbi-r.1
for
8071259
sot-r.1
for
102602320
cit-r.1
for
102608361
bdi-r.1
for
100825285
nta-r.1
for
107814661
nta-r.1
for
107806392


Ortholog ID: 6285
Species cre ath gma gma sly osa zma zma zma bra bra vvi ppo ppo mtr mtr tae tae ghi ghi ghi bna bna bna sbi sot cit bdi nta nta
Symbol CHLRE_06g264400v5 AT3G52250 LOC100810588 LOC100806246 LOC101263808 LOC9268524 LOC118476428 LOC100279451 LOC100384382 LOC103860750 LOC103841164 LOC100240985 LOC7468404 LOC7479891 LOC11405402 LOC25495914 LOC123180251 LOC123108621 LOC107915891 LOC107913477 LOC107919754 LOC106409513 LOC106367835 LOC106448464 LOC8071259 LOC102602320 LOC102608361 LOC100825285 LOC107814661 LOC107806392
Function* uncharacterized protein Duplicated homeodomain-like superfamily protein uncharacterized LOC100810588 uncharacterized LOC100806246 uncharacterized LOC101263808 uncharacterized LOC9268524 proline-rich protein 7-like uncharacterized LOC100279451 uncharacterized LOC100384382 uncharacterized LOC103860750 uncharacterized LOC103841164 uncharacterized LOC100240985 uncharacterized LOC7468404 uncharacterized LOC7479891 uncharacterized LOC11405402 uncharacterized LOC25495914 uncharacterized LOC123180251 uncharacterized LOC123108621 uncharacterized LOC107915891 uncharacterized LOC107913477 uncharacterized LOC107919754 uncharacterized LOC106409513 uncharacterized LOC106367835 uncharacterized LOC106448464 uncharacterized LOC8071259 uncharacterized LOC102602320 uncharacterized LOC102608361 uncharacterized LOC100825285 uncharacterized LOC107814661 uncharacterized LOC107806392
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 2
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 3
bra03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03083 Polycomb repressive complex 2
ghi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03083 Polycomb repressive complex 2
ghi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66053626 824390 100810588 100806246 101263808 9268524 118476428 100279451 100384382 103860750 103841164 100240985 7468404 7479891 11405402 25495914 123180251 123108621 107915891 107913477 107919754 106409513 106367835 106448464 8071259 102602320 102608361 100825285 107814661 107806392
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