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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g268050v5   uncharacterized protein 
 cre-r.1   CHLRE_17g710400v5   uncharacterized protein 
 cre-r.1   CHLRE_12g505550v5   uncharacterized protein 
 cre-r.1   CHLRE_12g504500v5   uncharacterized protein 
 ath-u.5   GAMMA-H2AX   gamma histone  
 ath-u.5   HTA10   histone H2A 10 
 ath-u.5   H2AXA   Histone superfamily protein 
 gma-u.5   100782447   probable histone H2A.1 
 gma-u.5   100818215   histone H2AX 
 gma-u.5   100816280   probable histone H2A.3 
 sly-u.5   101256806   probable histone H2AXb 
 sly-u.5   101255365   probable histone H2AXb 
 sly-u.5   101262690   histone H2A.6 
 osa-u.5   9267462   probable histone H2A.3 
 osa-u.5   4333939   probable histone H2AXa 
 osa-u.5   4343518   probable histone H2A.1 
 zma-u.5   100194327   Histone H2A 
 zma-u.5   100193816   uncharacterized LOC100193816 
 zma-u.5   103643930   probable histone H2AXa 
 bra-r.6   103835846   probable histone H2A.2 
 bra-r.6   103844917   histone H2A.6 
 bra-r.6   103836372   probable histone H2AXa 
 vvi-u.5   100259607   histone H2AX 
 vvi-u.5   100254490   histone H2AX 
 vvi-u.5   100257319   histone H2AX-like 
 ppo-u.5   18109775   histone H2AX 
 ppo-u.5   18095880   histone H2A.6 
 ppo-u.5   7494319   probable histone H2A.3 
 mtr-u.5   11430690   histone H2AX 
 mtr-u.5   11408670   histone H2A.6 
 mtr-u.5   11409476   histone H2A.6 
 tae-r.2   123146235   probable histone H2AXb 
 tae-r.2   123149421   probable histone H2AXb 
 tae-r.2   123149422   probable histone H2AXb 
 hvu-r.1   123401046   probable histone H2AXb 
 hvu-r.1   123407816   probable histone H2AXb 
 hvu-r.1   123425798   probable histone H2A.2 
 ghi-r.1   107926310   probable histone H2A.1 
 ghi-r.1   107953195   histone H2AX 
 ghi-r.1   107952215   histone H2AX 
 bna-r.1   106445749   probable histone H2A.3 
 bna-r.1   106451851   probable histone H2A.2 
 bna-r.1   106453183   probable histone H2AXa 
 sbi-r.1   8059983   probable histone H2AXa 
 sbi-r.1   8064629   probable histone H2AXb 
 sbi-r.1   8055640   probable histone H2AXb 
 sot-r.1   102592368   probable histone H2AXb 
 sot-r.1   102603971   histone H2AX-like 
 cit-r.1   102609655   histone H2A.6 
 cit-r.1   102618811   histone H2AX 
 cit-r.1   102619114   histone H2AX 
 bdi-r.1   100846160   probable histone H2AXa 
 bdi-r.1   100830704   probable histone H2A.7 
 bdi-r.1   100830394   probable histone H2A.2 
 nta-r.1   107791080   histone H2AX 
 nta-r.1   107768546   histone H2AX-like 
 nta-r.1   107831487   histone H2A.6-like 

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Top 50 coexpressed genes to CHLRE_06g268050v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g268050v5 (cre-r.1 coexpression data)

CoexMap"66053636"


creCHLRE_06g268050v5 | Entrez gene ID : 66053636    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 4 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03082 [list] [network] ATP-dependent chromatin remodeling (49 genes)
GO BP
GO CC
GO:0000786 [list] [network] nucleosome  (129 genes)  IEA  
GO MF
GO:0030527 [list] [network] structural constituent of chromatin  (130 genes)  IEA  
GO:0046982 [list] [network] protein heterodimerization activity  (139 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (670 genes)  IEA  
Protein XP_042923595.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1  (predict for XP_042923595.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for XP_042923595.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g268050v5
cre-r.1
for
CHLRE_17g710400v5
cre-r.1
for
CHLRE_12g505550v5
cre-r.1
for
CHLRE_12g504500v5
ath-u.5
for
GAMMA-H2AX
ath-u.5
for
HTA10
ath-u.5
for
H2AXA
gma-u.5
for
100782447
gma-u.5
for
100818215
gma-u.5
for
100816280
sly-u.5
for
101256806
sly-u.5
for
101255365
sly-u.5
for
101262690
osa-u.5
for
9267462
osa-u.5
for
4333939
osa-u.5
for
4343518
zma-u.5
for
100194327
zma-u.5
for
100193816
zma-u.5
for
103643930
bra-r.6
for
103835846
bra-r.6
for
103844917
bra-r.6
for
103836372
vvi-u.5
for
100259607
vvi-u.5
for
100254490
vvi-u.5
for
100257319
ppo-u.5
for
18109775
ppo-u.5
for
18095880
ppo-u.5
for
7494319
mtr-u.5
for
11430690
mtr-u.5
for
11408670
mtr-u.5
for
11409476
tae-r.2
for
123146235
tae-r.2
for
123149421
tae-r.2
for
123149422
hvu-r.1
for
123401046
hvu-r.1
for
123407816
hvu-r.1
for
123425798
ghi-r.1
for
107926310
ghi-r.1
for
107953195
ghi-r.1
for
107952215
bna-r.1
for
106445749
bna-r.1
for
106451851
bna-r.1
for
106453183
sbi-r.1
for
8059983
sbi-r.1
for
8064629
sbi-r.1
for
8055640
sot-r.1
for
102592368
sot-r.1
for
102603971
cit-r.1
for
102609655
cit-r.1
for
102618811
cit-r.1
for
102619114
bdi-r.1
for
100846160
bdi-r.1
for
100830704
bdi-r.1
for
100830394
nta-r.1
for
107791080
nta-r.1
for
107768546
nta-r.1
for
107831487


Ortholog ID: 242
Species cre cre cre ath ath ath gma gma gma sly sly sly osa osa osa zma zma zma bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr tae tae tae hvu hvu hvu ghi ghi ghi bna bna sbi sbi sbi sot sot sot cit cit cit bdi bdi bdi nta nta nta
Symbol CHLRE_06g268050v5 CHLRE_17g714100v5 CHLRE_12g506250v5 HTA10 H2AXA HTA13 LOC100818215 LOC100793396 LOC106798115 LOC101256806 LOC101262690 LOC101264975 LOC9267462 LOC4333939 LOC4352128 LOC100194327 LOC100193816 LOC100273666 LOC103844917 LOC103832842 LOC100259607 LOC100254490 LOC100257319 LOC18109775 LOC18095880 LOC112323895 LOC11430690 LOC11408670 LOC11443483 LOC123161694 LOC123044613 LOC123115855 LOC123401046 LOC123425798 LOC123425799 LOC107899136 LOC107920392 LOC107903497 LOC106345992 LOC125603080 LOC8059983 LOC8081716 LOC8081715 LOC102592368 LOC102586233 LOC102582157 LOC102618811 LOC102619114 LOC102620423 LOC100846160 LOC100830704 LOC100830394 LOC107800855 LOC107780380 LOC107822337
Function* uncharacterized protein uncharacterized protein uncharacterized protein histone H2A 10 Histone superfamily protein histone H2A 13 histone H2AX probable histone H2A.3 histone H2AX probable histone H2AXb histone H2A.6 histone H2AX-like probable histone H2A.3 probable histone H2AXa probable histone H2A.7 Histone H2A uncharacterized LOC100193816 uncharacterized LOC100273666 histone H2A.6 probable histone H2A.1 histone H2AX histone H2AX histone H2AX-like histone H2AX histone H2A.6 histone H2AX histone H2AX histone H2A.6 probable histone H2AXb probable histone H2AXb histone H2A.4-like probable histone H2AXb probable histone H2AXb probable histone H2A.2 histone H2A.4 probable histone H2AXb probable histone H2A.1 histone H2A.6 probable histone H2A.2 probable histone H2A.2 probable histone H2AXa probable histone H2A.2 probable histone H2A.1 probable histone H2AXb histone H2A.6-like probable histone H2A.1 histone H2AX histone H2AX histone H2AX probable histone H2AXa probable histone H2A.7 probable histone H2A.2 histone H2AX-like histone H2A.6-like histone H2A.6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 5
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 5
osa03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
bra00010 Glycolysis / Gluconeogenesis 2
bra00620 Pyruvate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00240 Pyrimidine metabolism 3
vvi01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
vvi01232 Nucleotide metabolism 3
vvi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo03013 Nucleocytoplasmic transport 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 4
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 6
sot00240 Pyrimidine metabolism 3
sot01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 2
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03060 Protein export 2
cit04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 6
bdi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 9
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66053636 5725954 5716480 841528 837409 821614 100818215 100793396 106798115 101256806 101262690 101264975 9267462 4333939 4352128 100194327 100193816 100273666 103844917 103832842 100259607 100254490 100257319 18109775 18095880 112323895 11430690 11408670 11443483 123161694 123044613 123115855 123401046 123425798 123425799 107899136 107920392 107903497 106345992 125603080 8059983 8081716 8081715 102592368 102586233 102582157 102618811 102619114 102620423 100846160 100830704 100830394 107800855 107780380 107822337
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