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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g269350v5   uncharacterized protein 
 ath-u.5   ILP1   GC-rich sequence DNA-binding factor-like protein 
 gma-u.5   100803160   transcriptional repressor ILP1 
 gma-u.5   100795566   transcriptional repressor ILP1 
 sly-u.5   101266217   transcriptional repressor ILP1 
 osa-u.5   4334819   transcriptional repressor ILP1 
 zma-u.5   103644332   transcriptional repressor ILP1 
 vvi-u.5   100245730   transcriptional repressor ILP1 
 ppo-u.5   18101260   transcriptional repressor ILP1 
 mtr-u.5   11437418   transcriptional repressor ILP1 

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Top 50 coexpressed genes to CHLRE_06g269350v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g269350v5 (cre-r.1 coexpression data)

CoexMap"66053643"


creCHLRE_06g269350v5 | Entrez gene ID : 66053643    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (103 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (670 genes)  IEA  
Protein XP_042923618.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 2,  nucl 1,  pero 1  (predict for XP_042923618.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042923618.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g269350v5

.
ath-u.5
for
ILP1

.
gma-u.5
for
100803160

.
gma-u.5
for
100795566

.
sly-u.5
for
101266217

.
osa-u.5
for
4334819

.
zma-u.5
for
103644332

.
vvi-u.5
for
100245730

.
ppo-u.5
for
18101260

.
mtr-u.5
for
11437418

.


Ortholog ID: 7707
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol ILP1 LOC100778522 LOC100803160 LOC101266217 LOC4334819 LOC103644332 LOC103847169 LOC100245730 LOC18101260 LOC11437418 LOC123087524 LOC123114407 LOC123395181 LOC107920221 LOC107916398 LOC106384959 LOC106419326 CHLRE_06g269350v5 LOC8061395 LOC102583033 LOC102612824 LOC100841329 LOC107793723 LOC107815500
Function* GC-rich sequence DNA-binding factor-like protein transcriptional repressor ILP1 transcriptional repressor ILP1 transcriptional repressor ILP1 transcriptional repressor ILP1 transcriptional repressor ILP1 transcriptional repressor ILP1 transcriptional repressor ILP1 transcriptional repressor ILP1 transcriptional repressor ILP1 transcriptional repressor ILP1 transcriptional repressor ILP1 transcriptional repressor ILP1 transcriptional repressor ILP1 transcriptional repressor ILP1 transcriptional repressor ILP1-like transcriptional repressor ILP1 uncharacterized protein transcriptional repressor ILP1 PAX3- and PAX7-binding protein 1 transcriptional repressor ILP1 transcriptional repressor ILP1 transcriptional repressor ILP1-like transcriptional repressor ILP1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03015 mRNA surveillance pathway 4
sly03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 6
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 7
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
vvi03250 Viral life cycle - HIV-1 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830755 100778522 100803160 101266217 4334819 103644332 103847169 100245730 18101260 11437418 123087524 123114407 123395181 107920221 107916398 106384959 106419326 66053643 8061395 102583033 102612824 100841329 107793723 107815500
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