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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g274800v5   uncharacterized protein 
 ath-u.5   GAMMA-H2AX   gamma histone  
 ath-u.5   HTA10   histone H2A 10 
 ath-u.5   H2AXA   Histone superfamily protein 
 gma-u.5   100782447   probable histone H2A.1 
 gma-u.5   100818215   histone H2AX 
 gma-u.5   100816280   probable histone H2A.3 
 sly-u.5   101256806   probable histone H2AXb 
 sly-u.5   101255365   probable histone H2AXb 
 sly-u.5   101262690   histone H2A.6 
 osa-u.5   9267462   probable histone H2A.3 
 osa-u.5   4333939   probable histone H2AXa 
 osa-u.5   4343518   probable histone H2A.1 
 zma-u.5   100194327   Histone H2A 
 zma-u.5   100193816   uncharacterized LOC100193816 
 zma-u.5   103643930   probable histone H2AXa 
 vvi-u.5   100259607   histone H2AX 
 vvi-u.5   100254490   histone H2AX 
 vvi-u.5   100257319   histone H2AX-like 
 ppo-u.5   18109775   histone H2AX 
 ppo-u.5   18095880   histone H2A.6 
 ppo-u.5   7494319   probable histone H2A.3 
 mtr-u.5   11430690   histone H2AX 
 mtr-u.5   11408670   histone H2A.6 
 mtr-u.5   11409476   histone H2A.6 

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Top 50 coexpressed genes to CHLRE_06g274800v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g274800v5 (cre-r.1 coexpression data)

CoexMap"66053665"


creCHLRE_06g274800v5 | Entrez gene ID : 66053665    
Species cre ath gma sly osa zma vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta tae
Paralog 1 3 3 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03082 [list] [network] ATP-dependent chromatin remodeling (49 genes)
GO BP
GO CC
GO:0000786 [list] [network] nucleosome  (129 genes)  IEA  
GO MF
GO:0030527 [list] [network] structural constituent of chromatin  (130 genes)  IEA  
GO:0046982 [list] [network] protein heterodimerization activity  (139 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (670 genes)  IEA  
Protein XP_042923701.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1  (predict for XP_042923701.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for XP_042923701.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g274800v5
ath-u.5
for
GAMMA-H2AX
ath-u.5
for
HTA10
ath-u.5
for
H2AXA
gma-u.5
for
100782447
gma-u.5
for
100818215
gma-u.5
for
100816280
sly-u.5
for
101256806
sly-u.5
for
101255365
sly-u.5
for
101262690
osa-u.5
for
9267462
osa-u.5
for
4333939
osa-u.5
for
4343518
zma-u.5
for
100194327
zma-u.5
for
100193816
zma-u.5
for
103643930
vvi-u.5
for
100259607
vvi-u.5
for
100254490
vvi-u.5
for
100257319
ppo-u.5
for
18109775
ppo-u.5
for
18095880
ppo-u.5
for
7494319
mtr-u.5
for
11430690
mtr-u.5
for
11408670
mtr-u.5
for
11409476


Ortholog ID: 242
Species cre cre ath ath gma gma sly sly osa osa zma zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol CHLRE_12g506250v5 CHLRE_17g714100v5 H2AXA HTA10 LOC106798115 LOC100818215 LOC101264975 LOC101262690 LOC9267462 LOC4333939 LOC100273666 LOC100194327 LOC103832842 LOC100259607 LOC100254490 LOC18095880 LOC112323895 LOC11443483 LOC11408670 LOC123044613 LOC123115855 LOC123425798 LOC123425799 LOC107899136 LOC107920392 LOC125603080 LOC8081715 LOC8081716 LOC102592368 LOC102586233 LOC102620423 LOC102618811 LOC100846160 LOC100830394 LOC107822337 LOC107800855
Function* uncharacterized protein uncharacterized protein Histone superfamily protein histone H2A 10 histone H2AX histone H2AX histone H2AX-like histone H2A.6 probable histone H2A.3 probable histone H2AXa uncharacterized LOC100273666 Histone H2A probable histone H2A.1 histone H2AX histone H2AX histone H2A.6 histone H2AX probable histone H2AXb histone H2A.6 histone H2A.4-like probable histone H2AXb probable histone H2A.2 histone H2A.4 probable histone H2AXb probable histone H2A.1 probable histone H2A.2 probable histone H2A.1 probable histone H2A.2 probable histone H2AXb histone H2A.6-like histone H2AX histone H2AX probable histone H2AXa probable histone H2A.2 histone H2A.6 histone H2AX-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 5
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 5
osa03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00240 Pyrimidine metabolism 3
vvi01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo03013 Nucleocytoplasmic transport 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 4
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 6
sot00240 Pyrimidine metabolism 3
sot01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 2
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 6
bdi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5716480 5725954 837409 841528 106798115 100818215 101264975 101262690 9267462 4333939 100273666 100194327 103832842 100259607 100254490 18095880 112323895 11443483 11408670 123044613 123115855 123425798 123425799 107899136 107920392 125603080 8081715 8081716 102592368 102586233 102620423 102618811 100846160 100830394 107822337 107800855
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