ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_06g276650v5	uncharacterized protein
ath-u.5	AT1G07660	Histone superfamily protein
ath-u.5	AT1G07820	Histone superfamily protein
ath-u.5	AT5G59970	Histone superfamily protein
gma-u.5	100804633	histone H4
gma-u.5	100800769	histone H4
gma-u.5	100805597	histone H4
sly-u.5	101264401	histone H4
sly-u.5	101256941	histone H4
osa-u.5	4339029	histone H4
osa-u.5	4347135	histone H4
osa-u.5	4347799	histone H4
zma-u.5	103631010	histone H4
zma-u.5	103633139	histone H4
zma-u.5	103636523	histone H4
vvi-u.5	100267358	histone H4
vvi-u.5	100244527	uncharacterized LOC100244527
ppo-u.5	7480176	histone H4
ppo-u.5	18099206	histone H4
ppo-u.5	18099209	histone H4
mtr-u.5	25490772	uncharacterized LOC25490772
mtr-u.5	11445181	histone H4
mtr-u.5	11446478	histone H4

Annotation

functional annotation

KEGG

GO BP

GO:0006334 [list] [network] nucleosome assembly

(73 genes)

IEA

GO CC

GO:0000786 [list] [network] nucleosome

(129 genes)

IEA

GO MF

GO:0030527 [list] [network] structural constituent of chromatin	(130 genes)	IEA
GO:0046982 [list] [network] protein heterodimerization activity	(139 genes)	IEA
GO:0003677 [list] [network] DNA binding	(670 genes)	IEA

Protein

XP_042923728.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, cyto 3

(predict for XP_042923728.1)

Subcellular
localization
TargetP

other 4, mito 3

(predict for XP_042923728.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_06g276650v5	ath-u.5 for AT1G07660	ath-u.5 for AT1G07820	ath-u.5 for AT5G59970	gma-u.5 for 100804633	gma-u.5 for 100800769	gma-u.5 for 100805597	sly-u.5 for 101264401	sly-u.5 for 101256941	osa-u.5 for 4339029	osa-u.5 for 4347135	osa-u.5 for 4347799	zma-u.5 for 103631010	zma-u.5 for 103633139	zma-u.5 for 103636523	vvi-u.5 for 100267358	vvi-u.5 for 100244527	ppo-u.5 for 7480176	ppo-u.5 for 18099206	ppo-u.5 for 18099209	mtr-u.5 for 25490772	mtr-u.5 for 11445181	mtr-u.5 for 11446478

Ortholog

Ortholog ID: 87

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

HIS4

Function^*

uncharacterized protein

histone H4

Histone superfamily protein

histone H4

uncharacterized LOC100244527

histone H4

uncharacterized LOC107932445

histone H4

uncharacterized LOC102605056

histone H4

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00240	Pyrimidine metabolism	2
ppo01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00240	Pyrimidine metabolism	2
ppo01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2
sbi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03082	ATP-dependent chromatin remodeling	4
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	2
sot03440	Homologous recombination	2
sot03460	Fanconi anemia pathway	2
sot03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	5
sot03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03082	ATP-dependent chromatin remodeling	2
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	3

Expression

Expression pattern

Entrez Gene ID^*

66053633

66055937

817423

836119

100800769

100793106

101264401

101252889

9270544

4349248

103633162

103636523

103829765

103865608

100263191

100244527

18099206

18099209

25497863

11440148

123065861

123046420

123445002

123401490

107932686

107932445

106437381

106347525

8061791

8060296

102605056

102597419

102629767

102614670

100845838

100823315

107816714

107798291

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_06g276650v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_06g276650v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	tae
Paralog	1	3	3	2	3	3	2	3	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_06g276650v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_06g276650v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**