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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_09g405650v5   uncharacterized protein 
 ath-u.5   AT2G42510   survival motor neuron interacting protein 
 ath-u.5   AT1G54380   spliceosome protein-like protein 
 gma-u.5   100809164   gem-associated protein 2 
 gma-u.5   100790542   gem-associated protein 2 
 sly-u.5   101253626   uncharacterized LOC101253626 
 osa-u.5   4350305   uncharacterized LOC4350305 
 zma-u.5   100285014   uncharacterized LOC100285014 
 bra-r.6   103866646   uncharacterized LOC103866646 
 vvi-u.5   100260062   uncharacterized LOC100260062 
 ppo-u.5   18106971   uncharacterized LOC18106971 
 ppo-u.5   7486030   uncharacterized LOC7486030 
 mtr-u.5   11446023   gem-associated protein 2 
 tae-r.2   123146057   gem-associated protein 2 
 tae-r.2   123139467   gem-associated protein 2 
 tae-r.2   123128900   uncharacterized LOC123128900 
 hvu-r.1   123403678   gem-associated protein 2-like 
 ghi-r.1   107914698   uncharacterized LOC107914698 
 ghi-r.1   107903773   uncharacterized LOC107903773 
 bna-r.1   106392403   uncharacterized LOC106392403 
 bna-r.1   106394230   uncharacterized LOC106394230 
 bna-r.1   106450617   uncharacterized LOC106450617 
 sbi-r.1   8066197   uncharacterized LOC8066197 
 sot-r.1   102594970   uncharacterized LOC102594970 
 cit-r.1   102619708   uncharacterized LOC102619708 
 bdi-r.1   100838808   gem-associated protein 2 
 nta-r.1   107780729   uncharacterized LOC107780729 
 nta-r.1   107770025   uncharacterized LOC107770025 
 nta-r.1   107788051   uncharacterized LOC107788051 

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Top 50 coexpressed genes to CHLRE_09g405650v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_09g405650v5 (cre-r.1 coexpression data)

CoexMap"66054842"


creCHLRE_09g405650v5 | Entrez gene ID : 66054842    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 2 2 1 1 1 1 1 2 1 3 1 2 3 1 1 1 1 3
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000387 [list] [network] spliceosomal snRNP assembly  (16 genes)  IEA  
GO CC
GO:0032797 [list] [network] SMN complex  (2 genes)  IEA  
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
Protein XP_042921458.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 3  (predict for XP_042921458.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042921458.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_09g405650v5
ath-u.5
for
AT2G42510
ath-u.5
for
AT1G54380
gma-u.5
for
100809164
gma-u.5
for
100790542
sly-u.5
for
101253626
osa-u.5
for
4350305
zma-u.5
for
100285014
bra-r.6
for
103866646
vvi-u.5
for
100260062
ppo-u.5
for
18106971
ppo-u.5
for
7486030
mtr-u.5
for
11446023
tae-r.2
for
123146057
tae-r.2
for
123139467
tae-r.2
for
123128900
hvu-r.1
for
123403678
ghi-r.1
for
107914698
ghi-r.1
for
107903773
bna-r.1
for
106392403
bna-r.1
for
106394230
bna-r.1
for
106450617
sbi-r.1
for
8066197
sot-r.1
for
102594970
cit-r.1
for
102619708
bdi-r.1
for
100838808
nta-r.1
for
107780729
nta-r.1
for
107770025
nta-r.1
for
107788051


Ortholog ID: 7966
Species cre ath ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae tae hvu ghi ghi bna bna bna sbi sot cit bdi nta nta nta
Symbol CHLRE_09g405650v5 AT2G42510 AT1G54380 LOC100809164 LOC100790542 LOC101253626 LOC4350305 LOC100285014 LOC103866646 LOC100260062 LOC18106971 LOC7486030 LOC11446023 LOC123146057 LOC123139467 LOC123128900 LOC123403678 LOC107914698 LOC107903773 LOC106392403 LOC106394230 LOC106450617 LOC8066197 LOC102594970 LOC102619708 LOC100838808 LOC107780729 LOC107770025 LOC107788051
Function* uncharacterized protein survival motor neuron interacting protein spliceosome protein-like protein gem-associated protein 2 gem-associated protein 2 uncharacterized LOC101253626 uncharacterized LOC4350305 uncharacterized LOC100285014 uncharacterized LOC103866646 uncharacterized LOC100260062 uncharacterized LOC18106971 uncharacterized LOC7486030 gem-associated protein 2 gem-associated protein 2 gem-associated protein 2 uncharacterized LOC123128900 gem-associated protein 2-like uncharacterized LOC107914698 uncharacterized LOC107903773 uncharacterized LOC106392403 uncharacterized LOC106394230 uncharacterized LOC106450617 uncharacterized LOC8066197 uncharacterized LOC102594970 uncharacterized LOC102619708 gem-associated protein 2 uncharacterized LOC107780729 uncharacterized LOC107770025 uncharacterized LOC107788051
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 3
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03420 Nucleotide excision repair 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 3
osa03030 DNA replication 2
osa03420 Nucleotide excision repair 2
osa03430 Mismatch repair 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 7
bra03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 3
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 7
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta04120 Ubiquitin mediated proteolysis 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66054842 818851 841879 100809164 100790542 101253626 4350305 100285014 103866646 100260062 18106971 7486030 11446023 123146057 123139467 123128900 123403678 107914698 107903773 106392403 106394230 106450617 8066197 102594970 102619708 100838808 107780729 107770025 107788051
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