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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g485438v5   uncharacterized protein 
 cre-r.1   CHLRE_06g296150v5   uncharacterized protein 
 cre-r.1   CHLRE_12g551550v5   uncharacterized protein 
 cre-r.1   CHLRE_16g685613v5   uncharacterized protein 
 gma-u.5   102665981   ATP-dependent DNA helicase PIF1 
 sly-u.5   101256894   uncharacterized LOC101256894 
 ppo-u.5   18101115   ATP-dependent DNA helicase PIF1 
 sot-r.1   107060881   ATP-dependent DNA helicase PIF1-like 
 nta-r.1   107787401   uncharacterized LOC107787401 
 nta-r.1   107825343   uncharacterized LOC107825343 

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Top 50 coexpressed genes to CHLRE_12g485438v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g485438v5 (cre-r.1 coexpression data)

CoexMap"66055391"


creCHLRE_12g485438v5 | Entrez gene ID : 66055391    
Species cre gma sly ppo sot nta vvi bra ath mtr hvu bna tae bdi osa zma cit ghi sbi
Paralog 4 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000723 [list] [network] telomere maintenance  (30 genes)  IEA  
GO:0006281 [list] [network] DNA repair  (229 genes)  IEA  
GO CC
GO MF
GO:0003678 [list] [network] DNA helicase activity  (49 genes)  IEA  
Protein XP_042917923.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  chlo_mito 3  (predict for XP_042917923.1)
Subcellular
localization
TargetP
other 6,  scret 4  (predict for XP_042917923.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g485438v5
cre-r.1
for
CHLRE_06g296150v5
cre-r.1
for
CHLRE_12g551550v5
cre-r.1
for
CHLRE_16g685613v5
gma-u.5
for
102665981
sly-u.5
for
101256894
ppo-u.5
for
18101115
sot-r.1
for
107060881
nta-r.1
for
107787401
nta-r.1
for
107825343


Ortholog ID: 15590
Species cre cre cre gma sly ppo sot nta nta
Symbol CHLRE_06g296150v5 CHLRE_12g551550v5 CHLRE_16g685613v5 LOC102665981 LOC101256894 LOC18101115 LOC107060881 LOC107787401 LOC107825343
Function* uncharacterized protein uncharacterized protein uncharacterized protein ATP-dependent DNA helicase PIF1 uncharacterized LOC101256894 ATP-dependent DNA helicase PIF1 ATP-dependent DNA helicase PIF1-like uncharacterized LOC107787401 uncharacterized LOC107825343
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 4
cre03420 Nucleotide excision repair 3
cre03430 Mismatch repair 3
cre03410 Base excision repair 3
cre03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5717057 66055808 66056750 102665981 101256894 18101115 107060881 107787401 107825343
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