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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g528200v5   uncharacterized protein 
 ath-u.5   emb2411   DNA replication helicase 
 gma-u.5   100799415   DNA replication ATP-dependent helicase/nuclease JHS1 
 sly-u.5   101244042   DNA replication ATP-dependent helicase/nuclease JHS1 
 osa-u.5   4336807   DNA replication ATP-dependent helicase/nuclease JHS1 
 zma-u.5   103648427   DNA replication ATP-dependent helicase/nuclease JHS1 
 vvi-u.5   100247844   DNA replication ATP-dependent helicase/nuclease JHS1 
 ppo-u.5   7463392   DNA replication ATP-dependent helicase/nuclease JHS1 
 mtr-u.5   25498012   DNA replication ATP-dependent helicase/nuclease JHS1 

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Top 50 coexpressed genes to CHLRE_12g528200v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g528200v5 (cre-r.1 coexpression data)

CoexMap"66055640"


creCHLRE_12g528200v5 | Entrez gene ID : 66055640    
Species cre ath gma sly osa zma vvi ppo mtr ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071932 [list] [network] replication fork reversal  (2 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (2907 genes)  IEA  
GO MF
GO:0017116 [list] [network] single-stranded DNA helicase activity  (9 genes)  IEA  
GO:0017108 [list] [network] 5'-flap endonuclease activity  (10 genes)  IEA  
Protein XP_042918618.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 3,  chlo_mito 3  (predict for XP_042918618.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for XP_042918618.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g528200v5

.
ath-u.5
for
emb2411

.
gma-u.5
for
100799415

.
sly-u.5
for
101244042

.
osa-u.5
for
4336807

.
zma-u.5
for
103648427

.
vvi-u.5
for
100247844

.
ppo-u.5
for
7463392

.
mtr-u.5
for
25498012

.


Ortholog ID: 9765
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol emb2411 LOC100799415 LOC101244042 LOC4336807 LOC103648427 LOC103843376 LOC100247844 LOC7463392 LOC25498012 LOC123046668 LOC123190382 LOC123427867 LOC107948602 LOC107896297 LOC106377018 LOC106420166 CHLRE_12g528200v5 LOC8071074 LOC102578342 LOC102608255 LOC100823226 LOC107759114 LOC142171427
Function* DNA replication helicase DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1-like DNA replication ATP-dependent helicase/nuclease JHS1 uncharacterized protein DNA replication ATP-dependent helicase/nuclease DNA2 DNA replication ATP-dependent helicase/nuclease DNA2 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease DNA2 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03460 Fanconi anemia pathway 3
ath04120 Ubiquitin mediated proteolysis 3
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 4
zma03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 5
vvi03410 Base excision repair 2
vvi03420 Nucleotide excision repair 2
vvi03440 Homologous recombination 2
vvi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 3
ppo03430 Mismatch repair 3
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
ppo03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03440 Homologous recombination 4
mtr03030 DNA replication 2
mtr03460 Fanconi anemia pathway 2
mtr00230 Purine metabolism 2
mtr00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 7
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
tae00230 Purine metabolism 2
tae00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 12
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 12
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 8
bna04814 Motor proteins 2
bna03018 RNA degradation 2
bna03030 DNA replication 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna04814 Motor proteins 2
bna03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 10
sot03440 Homologous recombination 3
sot03460 Fanconi anemia pathway 3
sot03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 7
bdi03440 Homologous recombination 3
bdi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837406 100799415 101244042 4336807 103648427 103843376 100247844 7463392 25498012 123046668 123190382 123427867 107948602 107896297 106377018 106420166 66055640 8071074 102578342 102608255 100823226 107759114 142171427
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