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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g550152v5   uncharacterized protein 
 ath-u.5   FAS1   chromatin assembly factor-1 (FASCIATA1) (FAS1) 
 gma-u.5   100811035   chromatin assembly factor 1 subunit FAS1 
 gma-u.5   100802884   chromatin assembly factor 1 subunit FAS1 
 sly-u.5   101250265   chromatin assembly factor 1 subunit FAS1 
 osa-u.5   4324973   chromatin assembly factor 1 subunit FSM-like 
 osa-u.5   107276899   chromatin assembly factor 1 subunit FSM-like 
 zma-u.5   103650893   chromatin assembly factor 1 subunit FSM 
 zma-u.5   103632188   chromatin assembly factor 1 subunit FSM 
 zma-u.5   100101530   chromatin assembly factor 1 subunit FSM 
 vvi-u.5   100261350   chromatin assembly factor 1 subunit FAS1 
 ppo-u.5   7472465   chromatin assembly factor 1 subunit FAS1 
 mtr-u.5   11426053   chromatin assembly factor 1 subunit FAS1 

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Top 50 coexpressed genes to CHLRE_12g550152v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g550152v5 (cre-r.1 coexpression data)

CoexMap"66055792"


creCHLRE_12g550152v5 | Entrez gene ID : 66055792    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 2 3 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006334 [list] [network] nucleosome assembly  (73 genes)  IEA  
GO CC
GO:0033186 [list] [network] CAF-1 complex  (4 genes)  IEA  
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
Protein XP_042919018.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 3,  E.R._plas 2,  plas 1,  E.R. 1,  cyto_nucl 1,  mito 1,  pero 1  (predict for XP_042919018.1)
Subcellular
localization
TargetP
scret 5  (predict for XP_042919018.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g550152v5

.
ath-u.5
for
FAS1

.
gma-u.5
for
100811035

.
gma-u.5
for
100802884

.
sly-u.5
for
101250265

.
osa-u.5
for
4324973

.
osa-u.5
for
107276899

.
zma-u.5
for
103650893

.
zma-u.5
for
103632188

.
zma-u.5
for
100101530

.
vvi-u.5
for
100261350

.
ppo-u.5
for
7472465

.
mtr-u.5
for
11426053

.


Ortholog ID: 6433
Species ath gma gma sly osa osa zma zma bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit bdi nta nta
Symbol FAS1 LOC100811035 LOC100802884 LOC101250265 LOC107276899 LOC4324973 LOC103632188 LOC103650893 LOC103831056 LOC100261350 LOC7472465 LOC11426053 LOC123104643 LOC123112906 LOC123400210 LOC123407392 LOC107951952 LOC107939692 LOC106426288 LOC106407368 CHLRE_12g550152v5 LOC8078671 LOC8057271 LOC102605655 LOC102609168 LOC100846224 LOC107768080 LOC107762321
Function* chromatin assembly factor-1 (FASCIATA1) (FAS1) chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FSM-like chromatin assembly factor 1 subunit FSM-like chromatin assembly factor 1 subunit FSM chromatin assembly factor 1 subunit FSM chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FSM chromatin assembly factor 1 subunit FSM chromatin assembly factor 1 subunit FSM uncharacterized LOC123407392 chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1 uncharacterized protein chromatin assembly factor 1 subunit FSM chromatin assembly factor 1 subunit FSM chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FSM chromatin assembly factor 1 subunit FAS1 chromatin assembly factor 1 subunit FAS1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 4
ath03460 Fanconi anemia pathway 4
ath03030 DNA replication 4
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 8
gma03440 Homologous recombination 3
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 8
gma03082 ATP-dependent chromatin remodeling 3
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 3
sly00230 Purine metabolism 2
sly00240 Pyrimidine metabolism 2
sly00480 Glutathione metabolism 2
sly01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 3
osa03440 Homologous recombination 3
osa03420 Nucleotide excision repair 2
osa03430 Mismatch repair 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 3
zma03030 DNA replication 2
zma03410 Base excision repair 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 5
bra03430 Mismatch repair 5
bra03440 Homologous recombination 5
bra03420 Nucleotide excision repair 4
bra03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 11
ppo03420 Nucleotide excision repair 3
ppo03440 Homologous recombination 2
ppo03460 Fanconi anemia pathway 2
ppo03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 4
ghi03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 4
ghi03460 Fanconi anemia pathway 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 10
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 12
bna03420 Nucleotide excision repair 5
bna03430 Mismatch repair 5
bna03440 Homologous recombination 5
bna03460 Fanconi anemia pathway 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 6
sot00230 Purine metabolism 2
sot00240 Pyrimidine metabolism 2
sot00480 Glutathione metabolism 2
sot01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 3
cit00230 Purine metabolism 2
cit00240 Pyrimidine metabolism 2
cit00480 Glutathione metabolism 2
cit01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 7
bdi03440 Homologous recombination 3
bdi03460 Fanconi anemia pathway 2
bdi03410 Base excision repair 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842858 100811035 100802884 101250265 107276899 4324973 103632188 103650893 103831056 100261350 7472465 11426053 123104643 123112906 123400210 123407392 107951952 107939692 106426288 106407368 66055792 8078671 8057271 102605655 102609168 100846224 107768080 107762321
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