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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_14g619100v5   uncharacterized protein 
 ath-u.5   CLPR1   CLP protease proteolytic subunit 1 
 gma-u.5   100820008   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 gma-u.5   100806258   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 sly-u.5   101256043   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 osa-u.5   4339792   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 zma-u.5   100274001   ATP-dependent Clp protease proteolytic subunit 
 bra-r.6   103832904   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 vvi-u.5   100253136   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 vvi-u.5   104877722   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic-like 
 ppo-u.5   7469631   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 mtr-u.5   11419358   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 tae-r.2   123183368   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 tae-r.2   123149534   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 tae-r.2   123070664   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 hvu-r.1   123452597   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 ghi-r.1   107945152   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 ghi-r.1   107898796   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 bna-r.1   106439053   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 bna-r.1   106385720   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic-like 
 bna-r.1   106350045   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic-like 
 sbi-r.1   8066561   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 sot-r.1   102583426   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 cit-r.1   102608550   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 bdi-r.1   100841936   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 nta-r.1   107766615   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic 
 nta-r.1   107771248   ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic-like 

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Top 50 coexpressed genes to CHLRE_14g619100v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_14g619100v5 (cre-r.1 coexpression data)

CoexMap"66056224"


creCHLRE_14g619100v5 | Entrez gene ID : 66056224    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 1 2 1 1 3 1 2 3 1 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006515 [list] [network] protein quality control for misfolded or incompletely synthesized proteins  (10 genes)  IEA  
GO CC
GO:0009368 [list] [network] endopeptidase Clp complex  (8 genes)  IEA  
GO MF
GO:0051117 [list] [network] ATPase binding  (11 genes)  IEA  
GO:0004176 [list] [network] ATP-dependent peptidase activity  (22 genes)  IEA  
GO:0004252 [list] [network] serine-type endopeptidase activity  (85 genes)  IEA  
Protein XP_042916820.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for XP_042916820.1)
Subcellular
localization
TargetP
mito 8,  chlo 4  (predict for XP_042916820.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_14g619100v5
ath-u.5
for
CLPR1
gma-u.5
for
100820008
gma-u.5
for
100806258
sly-u.5
for
101256043
osa-u.5
for
4339792
zma-u.5
for
100274001
bra-r.6
for
103832904
vvi-u.5
for
100253136
vvi-u.5
for
104877722
ppo-u.5
for
7469631
mtr-u.5
for
11419358
tae-r.2
for
123183368
tae-r.2
for
123149534
tae-r.2
for
123070664
hvu-r.1
for
123452597
ghi-r.1
for
107945152
ghi-r.1
for
107898796
bna-r.1
for
106439053
bna-r.1
for
106385720
bna-r.1
for
106350045
sbi-r.1
for
8066561
sot-r.1
for
102583426
cit-r.1
for
102608550
bdi-r.1
for
100841936
nta-r.1
for
107766615
nta-r.1
for
107771248


Ortholog ID: 8736
Species cre ath gma gma sly osa zma bra vvi vvi ppo mtr tae tae tae hvu ghi ghi bna bna bna sbi sot cit bdi nta nta
Symbol CHLRE_14g619100v5 CLPR1 LOC100820008 LOC100806258 LOC101256043 LOC4339792 LOC100274001 LOC103832904 LOC100253136 LOC104877722 LOC7469631 LOC11419358 LOC123183368 LOC123149534 LOC123070664 LOC123452597 LOC107945152 LOC107898796 LOC106439053 LOC106385720 LOC106350045 LOC8066561 LOC102583426 LOC102608550 LOC100841936 LOC107766615 LOC107771248
Function* uncharacterized protein CLP protease proteolytic subunit 1 ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic-like ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic-like ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic-like ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03060 Protein export 2
ppo00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00785 Lipoic acid metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00785 Lipoic acid metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 2
nta00195 Photosynthesis 2
nta00020 Citrate cycle (TCA cycle) 2
nta00480 Glutathione metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 2
nta00020 Citrate cycle (TCA cycle) 2
nta00480 Glutathione metabolism 2
nta01200 Carbon metabolism 2
nta01210 2-Oxocarboxylic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66056224 841420 100820008 100806258 101256043 4339792 100274001 103832904 100253136 104877722 7469631 11419358 123183368 123149534 123070664 123452597 107945152 107898796 106439053 106385720 106350045 8066561 102583426 102608550 100841936 107766615 107771248
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