ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_15g634750v5	uncharacterized protein
cre-r.1	CHLRE_14g609500v5	uncharacterized protein
cre-r.1	CHLRE_10g433500v5	uncharacterized protein
cre-r.1	CHLRE_06g278171v5	uncharacterized protein
ath-u.5	AT2G20670	sugar phosphate exchanger, putative (DUF506)
ath-u.5	AT1G77145	transmembrane protein, putative (DUF506)
gma-u.5	100797510	uncharacterized LOC100797510
gma-u.5	100800496	uncharacterized LOC100800496
gma-u.5	100800694	uncharacterized LOC100800694
sly-u.5	101268222	uncharacterized LOC101268222
sly-u.5	101261455	uncharacterized LOC101261455
osa-u.5	4325540	uncharacterized LOC4325540
osa-u.5	4331713	uncharacterized LOC4331713
zma-u.5	103636366	uncharacterized LOC103636366
zma-u.5	100193809	uncharacterized LOC100193809
bra-r.6	103857873	uncharacterized LOC103857873
bra-r.6	103857820	uncharacterized LOC103857820
bra-r.6	103842587	uncharacterized LOC103842587
ppo-u.5	7474168	uncharacterized LOC7474168
ppo-u.5	7474949	uncharacterized LOC7474949
ppo-u.5	7475758	uncharacterized LOC7475758
mtr-u.5	11432189	uncharacterized LOC11432189
mtr-u.5	11429433	uncharacterized LOC11429433
tae-r.2	123072857	uncharacterized LOC123072857
tae-r.2	123066162	uncharacterized LOC123066162
hvu-r.1	123445710	uncharacterized LOC123445710
hvu-r.1	123445196	uncharacterized LOC123445196
hvu-r.1	123449510	uncharacterized LOC123449510
ghi-r.1	107930438	uncharacterized LOC107930438
ghi-r.1	107929162	uncharacterized LOC107929162
ghi-r.1	107928563	uncharacterized LOC107928563
bna-r.1	106420592	uncharacterized LOC106420592
bna-r.1	BNAC03G44620D	uncharacterized BNAC03G44620D
sbi-r.1	8081257	uncharacterized LOC8081257
sbi-r.1	8078721	uncharacterized LOC8078721
sbi-r.1	8075566	uncharacterized LOC8075566
sot-r.1	107063386	uncharacterized LOC107063386
sot-r.1	102585280	uncharacterized LOC102585280
sot-r.1	102589081	uncharacterized LOC102589081
cit-r.1	102626752	hypothetical protein
cit-r.1	102625397	uncharacterized LOC102625397
cit-r.1	102620620	uncharacterized LOC102620620
bdi-r.1	100823652	uncharacterized LOC100823652
bdi-r.1	100837119	uncharacterized LOC100837119
bdi-r.1	100838073	uncharacterized LOC100838073
nta-r.1	107781553	uncharacterized LOC107781553
nta-r.1	107819798	uncharacterized LOC107819798
nta-r.1	107820621	uncharacterized LOC107820621

Top 50 coexpressed genes to CHLRE_15g634750v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_15g634750v5 (cre-r.1 coexpression data)

CoexMap"66056376"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_042916351.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, chlo 3, mito 2, cyto_nucl 2, cysk_nucl 2

(predict for XP_042916351.1)

Subcellular
localization
TargetP

other 6

(predict for XP_042916351.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_15g634750v5	cre-r.1 for CHLRE_14g609500v5	cre-r.1 for CHLRE_10g433500v5	cre-r.1 for CHLRE_06g278171v5	ath-u.5 for AT2G20670	ath-u.5 for AT1G77145	gma-u.5 for 100797510	gma-u.5 for 100800496	gma-u.5 for 100800694	sly-u.5 for 101268222	sly-u.5 for 101261455	osa-u.5 for 4325540	osa-u.5 for 4331713	zma-u.5 for 103636366	zma-u.5 for 100193809	bra-r.6 for 103857873	bra-r.6 for 103857820	bra-r.6 for 103842587	ppo-u.5 for 7474168	ppo-u.5 for 7474949	ppo-u.5 for 7475758	mtr-u.5 for 11432189	mtr-u.5 for 11429433	tae-r.2 for 123072857	tae-r.2 for 123066162	hvu-r.1 for 123445710	hvu-r.1 for 123445196	hvu-r.1 for 123449510	ghi-r.1 for 107930438	ghi-r.1 for 107929162	ghi-r.1 for 107928563	bna-r.1 for 106420592	bna-r.1 for BNAC03G44620D	sbi-r.1 for 8081257	sbi-r.1 for 8078721	sbi-r.1 for 8075566	sot-r.1 for 107063386	sot-r.1 for 102585280	sot-r.1 for 102589081	cit-r.1 for 102626752	cit-r.1 for 102625397	cit-r.1 for 102620620	bdi-r.1 for 100823652	bdi-r.1 for 100837119	bdi-r.1 for 100838073	nta-r.1 for 107781553	nta-r.1 for 107819798	nta-r.1 for 107820621

Ortholog

Ortholog ID: 62

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

transmembrane protein, putative (DUF506)

DNA-directed RNA polymerase subunit beta-beta protein, putative (DUF506)

PDDEXK-like family protein

uncharacterized LOC100780569

uncharacterized LOC100781835

uncharacterized LOC101259314

uncharacterized LOC101267284

uncharacterized LOC4326403

uncharacterized LOC100193809

DUF506 family protein

uncharacterized LOC103644178

uncharacterized LOC103842587

uncharacterized LOC103859987

uncharacterized LOC103868952

uncharacterized LOC100243761

uncharacterized LOC100244818

uncharacterized LOC100248895

uncharacterized LOC7474949

uncharacterized LOC7489569

uncharacterized LOC18104341

uncharacterized LOC25499188

uncharacterized LOC11438646

uncharacterized LOC123065606

uncharacterized LOC123096325

uncharacterized LOC123452710

uncharacterized LOC123416098

uncharacterized LOC107895060

uncharacterized LOC107934723

uncharacterized LOC107941654

uncharacterized LOC106368788

uncharacterized BNAA03G57760D

uncharacterized LOC125601810

uncharacterized LOC8075566

uncharacterized LOC8060750

uncharacterized LOC102605085

uncharacterized LOC102600765

uncharacterized LOC102584365

uncharacterized LOC102625397

uncharacterized LOC102630800

uncharacterized LOC102607201

uncharacterized LOC100823652

uncharacterized LOC100838977

uncharacterized LOC100820998

uncharacterized LOC107819798

uncharacterized LOC107802378

uncharacterized LOC107777544

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00920	Sulfur metabolism	4
cre02010	ABC transporters	4
cre01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00230	Purine metabolism	2
gma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00196	Photosynthesis - antenna proteins	3
sly00902	Monoterpenoid biosynthesis	2
sly00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00330	Arginine and proline metabolism	3
bra00410	beta-Alanine metabolism	2
bra00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00908	Zeatin biosynthesis	2
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00270	Cysteine and methionine metabolism	2
vvi00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	3
ppo00910	Nitrogen metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04146	Peroxisome	4
ppo00380	Tryptophan metabolism	2
ppo00630	Glyoxylate and dicarboxylate metabolism	2
ppo01200	Carbon metabolism	2
ppo04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00240	Pyrimidine metabolism	2
bna01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00561	Glycerolipid metabolism	3
bna00564	Glycerophospholipid metabolism	2
bna00740	Riboflavin metabolism	2
bna04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	5
sot04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00920	Sulfur metabolism	5
nta01320	Sulfur cycle	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00100	Steroid biosynthesis	2
nta00561	Glycerolipid metabolism	2
nta00564	Glycerophospholipid metabolism	2
nta00565	Ether lipid metabolism	2
nta00590	Arachidonic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	3
nta00051	Fructose and mannose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

66055002

5718042

5720740

844051

818464

100803860

100780569

100781835

101259314

101267284

4326403

100193809

103650854

103644178

103842587

103859987

103868952

100243761

100244818

100248895

7474949

7489569

18104341

25499188

11438646

123065606

123096325

123452710

123416098

107895060

107934723

107941654

106368788

106360094

125601810

8075566

8060750

102605085

102600765

102584365

102625397

102630800

102607201

100823652

100838977

100820998

107819798

107802378

107777544

The preparation time of this page was 0.4 [sec].


Species	cre	ath	gma	sly	osa	zma	bra	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta	vvi
Paralog	4	2	3	2	2	2	3	3	2	2	3	3	2	3	3	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_15g634750v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_15g634750v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**