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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_17g713000v5   uncharacterized protein 
 ath-u.5   AT1G09290   uncharacterized protein 
 gma-u.5   100797260   uncharacterized LOC100797260 
 sly-u.5   101253921   uncharacterized LOC101253921 
 osa-u.5   4330282   uncharacterized LOC4330282 
 zma-u.5   100217057   uncharacterized LOC100217057 
 vvi-u.5   100267955   uncharacterized LOC100267955 
 ppo-u.5   7462637   uncharacterized LOC7462637 
 mtr-u.5   25485599   uncharacterized LOC25485599 

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Top 50 coexpressed genes to CHLRE_17g713000v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_17g713000v5 (cre-r.1 coexpression data)

CoexMap"66056974"


creCHLRE_17g713000v5 | Entrez gene ID : 66056974    
Species cre ath gma sly osa zma vvi ppo mtr sot hvu tae cit sbi ghi bna nta bdi bra
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006400 [list] [network] tRNA modification  (79 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
Protein XP_042914574.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  cyto 3,  chlo_mito 3,  cyto_mito 3  (predict for XP_042914574.1)
Subcellular
localization
TargetP
other 7  (predict for XP_042914574.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_17g713000v5

.
ath-u.5
for
AT1G09290

.
gma-u.5
for
100797260

.
sly-u.5
for
101253921

.
osa-u.5
for
4330282

.
zma-u.5
for
100217057

.
vvi-u.5
for
100267955

.
ppo-u.5
for
7462637

.
mtr-u.5
for
25485599

.


Ortholog ID: 10439
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G09290 LOC100797260 LOC101253921 LOC4330282 LOC100217057 LOC103836345 LOC100267955 LOC7462637 LOC25485599 LOC123145072 LOC123137654 LOC123402289 LOC107909941 LOC107942780 LOC125591683 BNACNNG06750D CHLRE_17g713000v5 LOC110434369 LOC102578326 LOC102607912 LOC100839515 LOC107813379 LOC107772554
Function* uncharacterized protein uncharacterized LOC100797260 uncharacterized LOC101253921 uncharacterized LOC4330282 uncharacterized LOC100217057 uncharacterized LOC103836345 uncharacterized LOC100267955 uncharacterized LOC7462637 uncharacterized LOC25485599 uncharacterized LOC123145072 uncharacterized LOC123137654 uncharacterized LOC123402289 uncharacterized LOC107909941 uncharacterized LOC107942780 uncharacterized LOC125591683 uncharacterized BNACNNG06750D uncharacterized protein uncharacterized LOC110434369 uncharacterized LOC102578326 uncharacterized LOC102607912 uncharacterized LOC100839515 uncharacterized LOC107813379 uncharacterized LOC107772554
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00260 Glycine, serine and threonine metabolism 2
zma00261 Monobactam biosynthesis 2
zma00270 Cysteine and methionine metabolism 2
zma00300 Lysine biosynthesis 2
zma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
bra00220 Arginine biosynthesis 2
bra01210 2-Oxocarboxylic acid metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 4
bna00460 Cyanoamino acid metabolism 4
bna00630 Glyoxylate and dicarboxylate metabolism 4
bna00670 One carbon pool by folate 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 4
bna00460 Cyanoamino acid metabolism 4
bna00630 Glyoxylate and dicarboxylate metabolism 4
bna00670 One carbon pool by folate 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00261 Monobactam biosynthesis 2
bdi00300 Lysine biosynthesis 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03008 Ribosome biogenesis in eukaryotes 2
nta03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837450 100797260 101253921 4330282 100217057 103836345 100267955 7462637 25485599 123145072 123137654 123402289 107909941 107942780 125591683 106453158 66056974 110434369 102578326 102607912 100839515 107813379 107772554
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