ATTED-II : GeneCoexpression result

Species	Gene	Description
hvu-r.1	infA	translation initiation factor 1
bdi-r.1	infA	translation initiation factor 1
osa-u.5	infA	translation initiation factor 1
sbi-r.1	infA	translation initiation factor 1
ath-u.5	AT4G11175	Nucleic acid-binding, OB-fold-like protein
gma-u.5	INFA	translation initiation factor IF1
gma-u.5	100805978	translation initiation factor IF-1, chloroplastic
sly-u.5	infA	translation initiation factor IF1
sly-u.5	infA	translational initiation factor 1
bra-r.6	103833898	translation initiation factor IF-1, chloroplastic
vvi-u.5	infA	initiation factor 1
vvi-u.5	infA	translation initiation factor 1
ppo-u.5	7462939	translation initiation factor IF-1, chloroplastic
ppo-u.5	7495709	translation initiation factor IF-1, chloroplastic
mtr-u.5	11405552	translation initiation factor IF-1, chloroplastic
ghi-r.1	107947071	translation initiation factor IF-1, chloroplastic
ghi-r.1	121211154	translation initiation factor IF-1, chloroplastic
bna-r.1	106439652	translation initiation factor IF-1, chloroplastic
bna-r.1	106422395	translation initiation factor IF-1, chloroplastic
sot-r.1	102587284	translation initiation factor IF-1, chloroplastic
cit-r.1	102629092	translation initiation factor IF-1, chloroplastic
nta-r.1	107828560	translation initiation factor IF-1, chloroplastic
nta-r.1	107829303	translation initiation factor IF-1, chloroplastic
cre-r.1	CHLRE_04g218700v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

YP_010144459.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto_nucl 5, cyto 2

(predict for YP_010144459.1)

Subcellular
localization
TargetP

other 8

(predict for YP_010144459.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for infA	bdi-r.1 for infA	osa-u.5 for infA	sbi-r.1 for infA	ath-u.5 for AT4G11175	gma-u.5 for INFA	gma-u.5 for 100805978	sly-u.5 for infA	sly-u.5 for infA	bra-r.6 for 103833898	vvi-u.5 for infA	vvi-u.5 for infA	ppo-u.5 for 7462939	ppo-u.5 for 7495709	mtr-u.5 for 11405552	ghi-r.1 for 107947071	ghi-r.1 for 121211154	bna-r.1 for 106439652	bna-r.1 for 106422395	sot-r.1 for 102587284	cit-r.1 for 102629092	nta-r.1 for 107828560	nta-r.1 for 107829303	cre-r.1 for CHLRE_04g218700v5

Ortholog

Ortholog ID: 9008

Species

hvu

bdi

osa

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

infA

INFA

infA

infA

Function^*

translation initiation factor 1

Nucleic acid-binding, OB-fold-like protein

translation initiation factor IF1

translation initiation factor IF-1, chloroplastic

translation initiation factor IF1

translational initiation factor 1

translation initiation factor IF-1, chloroplastic

initiation factor 1

translation initiation factor 1

translation initiation factor IF-1, chloroplastic

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00630	Glyoxylate and dicarboxylate metabolism	15
hvu00710	Carbon fixation by Calvin cycle	15
hvu01200	Carbon metabolism	15
hvu00190	Oxidative phosphorylation	5
hvu00195	Photosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	16
sbi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	10
sly03020	RNA polymerase	4
sly00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	13
vvi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	13
vvi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	5
ppo01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	12
ppo00190	Oxidative phosphorylation	2
ppo00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	8
nta00350	Tyrosine metabolism	2
nta00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	14

Expression

Expression pattern

Entrez Gene ID^*

4525109

6439856

3131394

4549086

826719

547999

100805978

543687

3950377

103833898

7498632

4025134

7462939

7495709

11405552

107947071

121211154

106439652

106422395

102587284

102629092

107828560

107829303

66053216

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to infA (hvu-r.1 coexpression data)

Top 50 enrichment test to infA (hvu-r.1 coexpression data)


Species	hvu	bdi	osa	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre	tae	zma
Paralog	1	1	1	1	1	2	2	1	2	2	1	2	2	1	1	2	1	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to infA (hvu-r.1 coexpression data)

Top 50 enrichment test to infA (hvu-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**