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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   732620   SNI1 
 gma-r.7   732620   SNI1 
 gma-m.5   732620   SNI1 
 gma-u.5   100799607   negative regulator of systemic acquired resistance SNI1 
 mtr-u.5   25493046   negative regulator of systemic acquired resistance SNI1 
 vvi-u.5   100245146   negative regulator of systemic acquired resistance SNI1 
 sly-u.5   101244924   SNI1-like protein 
 osa-u.5   4329134   negative regulator of systemic acquired resistance SNI1 
 zma-u.5   103654875   negative regulator of systemic acquired resistance SNI1 

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Top 50 coexpressed genes to 732620 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 732620 (gma-u.5 coexpression data)

CoexMap"732620"


gmaLOC732620 | Entrez gene ID : 732620      
Species gma mtr vvi sly osa zma sbi nta bra cre hvu cit bdi ppo sot tae ath bna ghi
Paralog 4 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010113 [list] [network] negative regulation of systemic acquired resistance  (2 genes)  IEA  
GO:0045892 [list] [network] negative regulation of DNA-templated transcription  (117 genes)  IEA  
GO:0006974 [list] [network] DNA damage response  (552 genes)  IEA  
GO CC
GO:0030915 [list] [network] Smc5-Smc6 complex  (10 genes)  IEA  
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (772 genes)  IEA  
Protein NP_001237918.1 [sequence] [blastp]
XP_006593485.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  mito 1,  chlo 1,  golg 1,  cyto_mito 1,  cysk_nucl 1,  nucl_plas 1,  mito_plas 1  (predict for NP_001237918.1)
cyto 5,  nucl 1,  mito 1,  chlo 1,  pero 1,  golg 1,  cyto_mito 1,  cysk_nucl 1,  nucl_plas 1,  mito_plas 1  (predict for XP_006593485.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001237918.1)
other 9  (predict for XP_006593485.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
732620

.
gma-r.7
for
732620

.
gma-m.5
for
732620

.
gma-u.5
for
100799607

.
mtr-u.5
for
25493046

.
vvi-u.5
for
100245146

.
sly-u.5
for
101244924

.
osa-u.5
for
4329134

.
zma-u.5
for
103654875

.


Ortholog ID: 8543
Species gma gma sly osa zma vvi mtr tae tae hvu ghi ghi sbi sot cit bdi nta nta
Symbol LOC100799607 LOC732620 LOC101244924 LOC4329134 LOC103654875 LOC100245146 LOC25493046 LOC123144725 LOC123127618 LOC123401352 LOC107925022 LOC121222303 LOC8077635 SNI1 LOC102624079 LOC100842963 LOC107792834 LOC107784660
Function* negative regulator of systemic acquired resistance SNI1 SNI1 SNI1-like protein negative regulator of systemic acquired resistance SNI1 negative regulator of systemic acquired resistance SNI1 negative regulator of systemic acquired resistance SNI1 negative regulator of systemic acquired resistance SNI1 negative regulator of systemic acquired resistance SNI1 negative regulator of systemic acquired resistance SNI1 negative regulator of systemic acquired resistance SNI1 negative regulator of systemic acquired resistance SNI1 negative regulator of systemic acquired resistance SNI1 negative regulator of systemic acquired resistance SNI1 uncharacterized LOC102579425 negative regulator of systemic acquired resistance SNI1 negative regulator of systemic acquired resistance SNI1 negative regulator of systemic acquired resistance SNI1-like negative regulator of systemic acquired resistance SNI1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03430 Mismatch repair 2
osa03440 Homologous recombination 2
osa04144 Endocytosis 2
osa00240 Pyrimidine metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03430 Mismatch repair 3
mtr03010 Ribosome 2
mtr03030 DNA replication 2
mtr03410 Base excision repair 2
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 4
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 7
tae03440 Homologous recombination 6
tae03460 Fanconi anemia pathway 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 6
ghi03410 Base excision repair 6
ghi03420 Nucleotide excision repair 6
ghi03430 Mismatch repair 6
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 6
ghi03410 Base excision repair 6
ghi03420 Nucleotide excision repair 6
ghi03430 Mismatch repair 6
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03440 Homologous recombination 2
sbi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 8
sot03440 Homologous recombination 2
sot00240 Pyrimidine metabolism 2
sot01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00240 Pyrimidine metabolism 2
bdi01232 Nucleotide metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100799607 732620 101244924 4329134 103654875 100245146 25493046 123144725 123127618 123401352 107925022 121222303 8077635 102579425 102624079 100842963 107792834 107784660
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