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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   NIR   nitrate reductase 
 gma-r.7   NIR   nitrate reductase 
 gma-m.5   NIR   nitrate reductase 
 gma-u.5   100775519   ferredoxin--nitrite reductase, chloroplastic 
 mtr-u.5   11445727   ferredoxin--nitrite reductase, chloroplastic 
 ppo-u.5   18097785   ferredoxin--nitrite reductase, chloroplastic 
 ath-u.5   NIR1   nitrite reductase 1 
 vvi-u.5   100253671   ferredoxin--nitrite reductase, chloroplastic-like 
 sly-u.5   nii1   nitrite reductase 
 sly-u.5   778326   ferredoxin--nitrite reductase, chloroplastic 
 osa-u.5   4326014   ferredoxin--nitrite reductase, chloroplastic-like 
 osa-u.5   4330835   ferredoxin--nitrite reductase, chloroplastic-like 
 zma-u.5   542264   nitrite reductase2 
 zma-u.5   103627781   ferredoxin--nitrite reductase, chloroplastic-like 

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Top 50 coexpressed genes to NIR (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to NIR (gma-u.5 coexpression data)

CoexMap"732631"


gmaNIR | Entrez gene ID : 732631      
Species gma mtr ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 1 1 1 1 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00910 [list] [network] Nitrogen metabolism (60 genes)
gmx01310 [list] [network] Nitrogen cycle (6 genes)
GO BP
GO CC
GO MF
GO:0051536 [list] [network] iron-sulfur cluster binding  (142 genes)  IEA  
GO:0020037 [list] [network] heme binding  (625 genes)  IEA  
GO:0016491 [list] [network] oxidoreductase activity  (2221 genes)  IEA  
Protein NP_001274384.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 4,  chlo 3,  golg 1,  chlo_mito 1  (predict for NP_001274384.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001274384.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
NIR
gma-r.7
for
NIR
gma-m.5
for
NIR
gma-u.5
for
100775519
mtr-u.5
for
11445727
ppo-u.5
for
18097785
ath-u.5
for
NIR1
vvi-u.5
for
100253671
sly-u.5
for
nii1
sly-u.5
for
778326
osa-u.5
for
4326014
osa-u.5
for
4330835
zma-u.5
for
542264
zma-u.5
for
103627781


Ortholog ID: 6802
Species gma gma mtr ppo ath bra bra vvi ghi bna bna cit sly sly sot sot nta nta osa osa zma zma tae tae hvu sbi bdi cre
Symbol LOC100775519 NIR LOC11445727 LOC18097785 NIR1 LOC103844354 LOC103848008 LOC100253671 LOC107894267 LOC106361629 LOC106445633 LOC102616714 nii1 LOC778326 LOC102596437 NIR LOC107798816 LOC107765655 LOC4330835 LOC4326014 LOC103627781 LOC542264 LOC100240699 LOC123138457 LOC123402599 LOC8075200 LOC100834109 CHLRE_09g410750v5
Function* ferredoxin--nitrite reductase, chloroplastic nitrate reductase ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic nitrite reductase 1 ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic-like ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic nitrite reductase ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic-like ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic-like ferredoxin--nitrite reductase, chloroplastic-like ferredoxin--nitrite reductase, chloroplastic-like ferredoxin--nitrite reductase, chloroplastic-like nitrite reductase2 ferredoxin-nitrite reductase ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 6
gma01310 Nitrogen cycle 6
gma01200 Carbon metabolism 4
gma01240 Biosynthesis of cofactors 3
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 6
gma01310 Nitrogen cycle 6
gma01200 Carbon metabolism 4
gma04075 Plant hormone signal transduction 2
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00910 Nitrogen metabolism 4
mtr01240 Biosynthesis of cofactors 3
mtr01310 Nitrogen cycle 3
mtr00250 Alanine, aspartate and glutamate metabolism 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00910 Nitrogen metabolism 3
ppo01310 Nitrogen cycle 3
ppo00030 Pentose phosphate pathway 3
ppo00480 Glutathione metabolism 3
ppo01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00910 Nitrogen metabolism 4
ath01230 Biosynthesis of amino acids 3
ath01310 Nitrogen cycle 3
ath00030 Pentose phosphate pathway 2
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 5
bra00910 Nitrogen metabolism 5
bra01310 Nitrogen cycle 5
bra00030 Pentose phosphate pathway 3
bra00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 6
bra00910 Nitrogen metabolism 4
bra01310 Nitrogen cycle 4
bra00620 Pyruvate metabolism 3
bra00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00910 Nitrogen metabolism 3
vvi01240 Biosynthesis of cofactors 3
vvi01310 Nitrogen cycle 2
vvi00760 Nicotinate and nicotinamide metabolism 2
vvi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 7
ghi01310 Nitrogen cycle 7
ghi00710 Carbon fixation by Calvin cycle 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01200 Carbon metabolism 6
bna00030 Pentose phosphate pathway 4
bna00480 Glutathione metabolism 4
bna00910 Nitrogen metabolism 4
bna01310 Nitrogen cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00910 Nitrogen metabolism 4
bna01310 Nitrogen cycle 4
bna00330 Arginine and proline metabolism 3
bna01200 Carbon metabolism 3
bna00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 4
cit00910 Nitrogen metabolism 2
cit01310 Nitrogen cycle 2
cit00620 Pyruvate metabolism 2
cit00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 4
sly00630 Glyoxylate and dicarboxylate metabolism 4
sly01230 Biosynthesis of amino acids 3
sly00910 Nitrogen metabolism 3
sly00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 5
sly04075 Plant hormone signal transduction 5
sly01200 Carbon metabolism 3
sly00010 Glycolysis / Gluconeogenesis 2
sly00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 6
sot01230 Biosynthesis of amino acids 5
sot00910 Nitrogen metabolism 4
sot00250 Alanine, aspartate and glutamate metabolism 2
sot00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 7
sot00620 Pyruvate metabolism 5
sot00630 Glyoxylate and dicarboxylate metabolism 3
sot00910 Nitrogen metabolism 3
sot01310 Nitrogen cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01310 Nitrogen cycle 6
nta00910 Nitrogen metabolism 5
nta00920 Sulfur metabolism 4
nta00270 Cysteine and methionine metabolism 3
nta00460 Cyanoamino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00910 Nitrogen metabolism 6
nta01310 Nitrogen cycle 6
nta01240 Biosynthesis of cofactors 4
nta00620 Pyruvate metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00910 Nitrogen metabolism 4
osa01310 Nitrogen cycle 4
osa00195 Photosynthesis 2
osa00030 Pentose phosphate pathway 2
osa00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00910 Nitrogen metabolism 5
osa01310 Nitrogen cycle 5
osa01200 Carbon metabolism 3
osa00195 Photosynthesis 2
osa00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00910 Nitrogen metabolism 4
zma01310 Nitrogen cycle 3
zma01200 Carbon metabolism 3
zma00195 Photosynthesis 3
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00910 Nitrogen metabolism 4
zma01310 Nitrogen cycle 3
zma01200 Carbon metabolism 3
zma00195 Photosynthesis 3
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00910 Nitrogen metabolism 4
tae01310 Nitrogen cycle 4
tae00620 Pyruvate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00910 Nitrogen metabolism 8
tae01310 Nitrogen cycle 8
tae00620 Pyruvate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00620 Pyruvate metabolism 2
hvu01200 Carbon metabolism 2
hvu00910 Nitrogen metabolism 2
hvu01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00910 Nitrogen metabolism 6
sbi01310 Nitrogen cycle 4
sbi00030 Pentose phosphate pathway 2
sbi01200 Carbon metabolism 2
sbi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00910 Nitrogen metabolism 3
bdi01310 Nitrogen cycle 3
bdi01240 Biosynthesis of cofactors 2
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 3
cre04145 Phagosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100775519 732631 11445727 18097785 816055 103844354 103848008 100253671 107894267 106361629 106445633 102616714 778325 778326 102596437 102581851 107798816 107765655 4330835 4326014 103627781 542264 100240699 123138457 123402599 8075200 100834109 5722281
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