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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   CHI3A1   chalcone isomerase 3A1 
 gma-r.7   CHI3A1   chalcone isomerase 3A1 
 gma-m.5   CHI3A1   chalcone isomerase 3A1 
 gma-u.5   CHI3A2   chalcone isomerase 
 mtr-u.5   25487136   fatty-acid-binding protein 3, chloroplastic 
 ppo-u.5   18103319   fatty-acid-binding protein 3, chloroplastic 
 ath-u.5   FAP3   Chalcone-flavanone isomerase family protein 
 vvi-u.5   100267517   fatty-acid-binding protein 3, chloroplastic 
 sly-u.5   101252704   fatty-acid-binding protein 3, chloroplastic 
 osa-u.5   4329165   fatty-acid-binding protein 3, chloroplastic 
 zma-u.5   100285485   uncharacterized LOC100285485 

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Top 50 coexpressed genes to CHI3A1 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHI3A1 (gma-u.5 coexpression data)

CoexMap"732649"


gmaCHI3A1 | Entrez gene ID : 732649      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006631 [list] [network] fatty acid metabolic process  (269 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (198 genes)  IEA  
GO MF
GO:0016872 [list] [network] intramolecular lyase activity  (18 genes)  IEA  
GO:0005504 [list] [network] fatty acid binding  (44 genes)  IEA  
Protein NP_001238390.1 [sequence] [blastp]
XP_006593488.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_001238390.1)
chlo 9,  chlo_mito 5  (predict for XP_006593488.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001238390.1)
chlo 9  (predict for XP_006593488.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
CHI3A1

.
gma-r.7
for
CHI3A1

.
gma-m.5
for
CHI3A1

.
gma-u.5
for
CHI3A2

.
mtr-u.5
for
25487136

.
ppo-u.5
for
18103319

.
ath-u.5
for
FAP3

.
vvi-u.5
for
100267517

.
sly-u.5
for
101252704

.
osa-u.5
for
4329165

.
zma-u.5
for
100285485

.


Ortholog ID: 9263
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi bna bna cre cre sbi sot cit bdi nta nta
Symbol FAP3 CHI3A2 CHI3A1 LOC101252704 LOC4329165 LOC100285485 LOC103871121 LOC100267517 LOC18103319 LOC25487136 LOC123075962 LOC123085440 LOC123403342 LOC107918454 LOC106451481 LOC106345937 CHLRE_12g517100v5 CHLRE_01g007600v5 LOC8078326 LOC102592573 LOC102614051 LOC100834808 LOC107775821 LOC107796846
Function* Chalcone-flavanone isomerase family protein chalcone isomerase chalcone isomerase 3A1 fatty-acid-binding protein 3, chloroplastic fatty-acid-binding protein 3, chloroplastic uncharacterized LOC100285485 fatty-acid-binding protein 3, chloroplastic fatty-acid-binding protein 3, chloroplastic fatty-acid-binding protein 3, chloroplastic fatty-acid-binding protein 3, chloroplastic fatty-acid-binding protein 3, chloroplastic fatty-acid-binding protein 3, chloroplastic fatty-acid-binding protein 3, chloroplastic fatty-acid-binding protein 3, chloroplastic fatty-acid-binding protein 3, chloroplastic fatty-acid-binding protein 3, chloroplastic uncharacterized protein uncharacterized protein fatty-acid-binding protein 3, chloroplastic fatty-acid-binding protein 3, chloroplastic fatty-acid-binding protein 3, chloroplastic fatty-acid-binding protein 3, chloroplastic fatty-acid-binding protein 3, chloroplastic fatty-acid-binding protein 3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 5
ath01240 Biosynthesis of cofactors 5
ath00620 Pyruvate metabolism 4
ath00061 Fatty acid biosynthesis 4
ath01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 3
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
gma00052 Galactose metabolism 2
gma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma01230 Biosynthesis of amino acids 4
gma00061 Fatty acid biosynthesis 4
gma01212 Fatty acid metabolism 4
gma00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00061 Fatty acid biosynthesis 11
bra01212 Fatty acid metabolism 11
bra00620 Pyruvate metabolism 10
bra01200 Carbon metabolism 10
bra00640 Propanoate metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00061 Fatty acid biosynthesis 11
mtr01212 Fatty acid metabolism 11
mtr00620 Pyruvate metabolism 10
mtr01200 Carbon metabolism 10
mtr01240 Biosynthesis of cofactors 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 8
hvu00630 Glyoxylate and dicarboxylate metabolism 6
hvu00710 Carbon fixation by Calvin cycle 6
hvu00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 4
ghi03010 Ribosome 4
ghi00053 Ascorbate and aldarate metabolism 2
ghi00860 Porphyrin metabolism 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 5
bna00780 Biotin metabolism 5
bna01212 Fatty acid metabolism 5
bna01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 5
bna00780 Biotin metabolism 5
bna01212 Fatty acid metabolism 5
bna01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 8
cre00061 Fatty acid biosynthesis 8
cre01212 Fatty acid metabolism 8
cre00620 Pyruvate metabolism 7
cre01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi01240 Biosynthesis of cofactors 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 5
bdi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta00220 Arginine biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta00190 Oxidative phosphorylation 4
nta00220 Arginine biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta00230 Purine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841787 100804241 732649 101252704 4329165 100285485 103871121 100267517 18103319 25487136 123075962 123085440 123403342 107918454 106451481 106345937 5722645 5725859 8078326 102592573 102614051 100834808 107775821 107796846
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