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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   PGN   polygalacturonase 
 gma-r.7   PGN   polygalacturonase 
 mtr-u.5   11431564   probable polygalacturonase At1g80170 
 mtr-u.5   25495857   probable polygalacturonase At3g15720 
 sly-u.5   PGcat   polygalacturonase 
 sly-u.5   101256371   probable polygalacturonase At3g15720 

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Top 50 coexpressed genes to PGN (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PGN (gma-u.5 coexpression data)

CoexMap"732657"


gmaPGN | Entrez gene ID : 732657    
Species gma mtr sly tae osa zma bdi vvi sbi ppo bna nta cre sot hvu ath ghi cit bra
Paralog 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00040 [list] [network] Pentose and glucuronate interconversions (188 genes)
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (1295 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (99 genes)  IEA  
Protein NP_001238514.2 [sequence] [blastp]
NP_001338686.1 [sequence] [blastp]
XP_040862414.1 [sequence] [blastp]
Subcellular
localization
wolf
cysk 5,  cyto 2,  extr 1,  cyto_nucl 1  (predict for NP_001238514.2)
cyto 4,  extr 4,  E.R. 1,  chlo 1,  mito 1,  chlo_mito 1,  E.R._vacu 1,  E.R._plas 1  (predict for NP_001338686.1)
cysk 5,  cyto 2,  extr 1,  cyto_nucl 1  (predict for XP_040862414.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001238514.2)
scret 9  (predict for NP_001338686.1)
other 7  (predict for XP_040862414.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
PGN

.
gma-r.7
for
PGN

.
mtr-u.5
for
11431564

.
mtr-u.5
for
25495857

.
sly-u.5
for
PGcat

.
sly-u.5
for
101256371

.


Ortholog ID: 2099
Species gma sly sly sot nta nta
Symbol LOC100787465 PGcat LOC101256371 LOC102602941 LOC107761023 LOC107776714
Function* probable polygalacturonase At1g80170 polygalacturonase probable polygalacturonase At3g15720 probable polygalacturonase At3g15720 putative polygalacturonase At3g15720 putative polygalacturonase At3g15720
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00511 Other glycan degradation 2
sly04142 Lysosome 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00920 Sulfur metabolism 3
sly01320 Sulfur cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01212 Fatty acid metabolism 3
sot00061 Fatty acid biosynthesis 2
sot00780 Biotin metabolism 2
sot01240 Biosynthesis of cofactors 2
sot00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 3
nta04075 Plant hormone signal transduction 3
nta02010 ABC transporters 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100787465 543587 101256371 102602941 107761023 107776714
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