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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7455425   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 ppo-r.4   7455425   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 ppo-m.4   7455425   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 ppo-u.5   7481404   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 gma-u.5   100802533   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 gma-u.5   100798621   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like 
 mtr-u.5   11426620   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 mtr-u.5   11412270   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 ath-u.5   CLPP5   nuclear encoded CLP protease 5 
 vvi-u.5   100246849   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 sly-u.5   clpP2   Clp protease 2 proteolytic subunit 
 osa-u.5   4332615   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 zma-u.5   103634566   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like 
 zma-u.5   100194286   uncharacterized LOC100194286 

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Top 50 coexpressed genes to 7455425 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7455425 (ppo-u.5 coexpression data)

CoexMap"7455425"


ppoLOC7455425 | Entrez gene ID : 7455425    
Species ppo gma mtr ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 2 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006515 [list] [network] protein quality control for misfolded or incompletely synthesized proteins  (20 genes)  IEA  
GO CC
GO:0009368 [list] [network] endopeptidase Clp complex  (14 genes)  IEA  
GO MF
GO:0051117 [list] [network] ATPase binding  (20 genes)  IEA  
GO:0004176 [list] [network] ATP-dependent peptidase activity  (40 genes)  IEA  
GO:0004252 [list] [network] serine-type endopeptidase activity  (144 genes)  IEA  
Protein XP_002320293.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_002320293.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002320293.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7455425
ppo-r.4
for
7455425
ppo-m.4
for
7455425
ppo-u.5
for
7481404
gma-u.5
for
100802533
gma-u.5
for
100798621
mtr-u.5
for
11426620
mtr-u.5
for
11412270
ath-u.5
for
CLPP5
vvi-u.5
for
100246849
sly-u.5
for
clpP2
osa-u.5
for
4332615
zma-u.5
for
103634566
zma-u.5
for
100194286


Ortholog ID: 5417
Species ppo ppo gma gma mtr mtr ath bra bra vvi ghi ghi bna bna cit cit sly sot nta nta osa zma zma tae tae hvu sbi bdi cre
Symbol LOC7481404 LOC7455425 LOC100798621 LOC100802533 LOC11412270 LOC11426620 CLPP5 LOC103844577 LOC103836649 LOC100246849 LOC107924745 LOC107946002 LOC106370909 LOC106401510 LOC102607512 LOC102622645 clpP2 LOC102579725 LOC107809867 LOC107777151 LOC4332615 LOC103634566 LOC100194286 LOC123097672 LOC123085673 LOC123448819 LOC8083988 LOC100831676 CHLRE_12g486100v5
Function* ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic nuclear encoded CLP protease 5 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like Clp protease 2 proteolytic subunit ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like uncharacterized LOC100194286 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo01240 Biosynthesis of cofactors 2
ppo00240 Pyrimidine metabolism 2
ppo01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
ppo00053 Ascorbate and aldarate metabolism 2
ppo00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 2
gma00920 Sulfur metabolism 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
gma01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00730 Thiamine metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00040 Pentose and glucuronate interconversions 2
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00480 Glutathione metabolism 2
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 3
hvu00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00260 Glycine, serine and threonine metabolism 2
cre01200 Carbon metabolism 2
cre01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7481404 7455425 100798621 100802533 11412270 11426620 839433 103844577 103836649 100246849 107924745 107946002 106370909 106401510 102607512 102622645 544244 102579725 107809867 107777151 4332615 103634566 100194286 123097672 123085673 123448819 8083988 100831676 5716620
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