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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7455681   protein-tyrosine-phosphatase IBR5 
 ppo-r.4   7455681   protein-tyrosine-phosphatase IBR5 
 gma-u.5   100808721   protein-tyrosine-phosphatase IBR5 
 gma-u.5   100806021   protein-tyrosine-phosphatase IBR5 
 mtr-u.5   11420754   protein-tyrosine-phosphatase IBR5 
 ath-u.5   IBR5   indole-3-butyric acid response 5 
 vvi-u.5   100249965   protein-tyrosine-phosphatase IBR5 
 sly-u.5   101267250   protein-tyrosine-phosphatase IBR5 
 sly-u.5   101252462   protein-tyrosine-phosphatase IBR5 
 osa-u.5   4340847   protein-tyrosine-phosphatase IBR5 
 osa-u.5   4330549   protein-tyrosine-phosphatase IBR5 
 zma-u.5   100285227   uncharacterized LOC100285227 
 zma-u.5   100285381   dual specificity protein phosphatase 4 

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Top 50 coexpressed genes to 7455681 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7455681 (ppo-u.5 coexpression data)

CoexMap"7455681"


ppoLOC7455681 | Entrez gene ID : 7455681    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 2 1 1 1 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop04148 [list] [network] Efferocytosis (75 genes)
GO BP
GO:0043407 [list] [network] negative regulation of MAP kinase activity  (1 genes)  IEA  
GO:0009734 [list] [network] auxin-activated signaling pathway  (29 genes)  IEA  
GO:0009738 [list] [network] abscisic acid-activated signaling pathway  (41 genes)  IEA  
GO:0006470 [list] [network] protein dephosphorylation  (162 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0033549 [list] [network] MAP kinase phosphatase activity  (2 genes)  IEA  
GO:0008138 [list] [network] protein tyrosine/serine/threonine phosphatase activity  (21 genes)  IEA  
Protein XP_002321157.2 [sequence] [blastp]
XP_002321278.2 [sequence] [blastp]
XP_024440046.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  pero 2,  chlo 1,  cyto_pero 1  (predict for XP_002321157.2)
nucl 7,  chlo 1,  cyto 1,  pero 1,  chlo_mito 1,  cyto_pero 1  (predict for XP_002321278.2)
nucl 6,  pero 2,  chlo 1,  cyto_pero 1  (predict for XP_024440046.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for XP_002321157.2)
other 8,  mito 3  (predict for XP_002321278.2)
other 8,  mito 3  (predict for XP_024440046.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7455681

.
ppo-r.4
for
7455681

.
gma-u.5
for
100808721

.
gma-u.5
for
100806021

.
mtr-u.5
for
11420754

.
ath-u.5
for
IBR5

.
vvi-u.5
for
100249965

.
sly-u.5
for
101267250

.
sly-u.5
for
101252462

.
osa-u.5
for
4340847

.
osa-u.5
for
4330549

.
zma-u.5
for
100285227

.
zma-u.5
for
100285381

.


Ortholog ID: 4335
Species ath gma gma sly sly osa osa zma zma bra bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol IBR5 LOC100808721 LOC100806021 LOC101267250 LOC101252462 LOC4330549 LOC4340847 LOC100285227 LOC100285381 LOC103828529 LOC103860307 LOC100249965 LOC7455681 LOC11420754 LOC123156251 LOC123164991 LOC123402502 LOC123407850 LOC121232141 LOC107955728 LOC106357784 LOC111210588 CHLRE_03g193350v5 LOC8071772 LOC8072850 LOC102582090 LOC102579669 LOC102631010 LOC100842961 LOC100843241 LOC107801872 LOC107798553
Function* indole-3-butyric acid response 5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 uncharacterized LOC100285227 dual specificity protein phosphatase 4 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5-like protein-tyrosine-phosphatase IBR5-like protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5-like protein-tyrosine-phosphatase IBR5 uncharacterized protein protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5-like protein-tyrosine-phosphatase IBR5-like protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
gma00640 Propanoate metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly03020 RNA polymerase 2
sly03015 mRNA surveillance pathway 2
sly04382 Cornified envelope formation 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 4
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 5
vvi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00280 Valine, leucine and isoleucine degradation 5
ppo04148 Efferocytosis 2
ppo00310 Lysine degradation 2
ppo01200 Carbon metabolism 2
ppo00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 4
tae04148 Efferocytosis 3
tae00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 6
tae04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
hvu04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 4
bna00562 Inositol phosphate metabolism 2
bna04070 Phosphatidylinositol signaling system 2
bna04136 Autophagy - other 2
bna04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
nta03050 Proteasome 2
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 814997 100808721 100806021 101267250 101252462 4330549 4340847 100285227 100285381 103828529 103860307 100249965 7455681 11420754 123156251 123164991 123402502 123407850 121232141 107955728 106357784 111210588 5718699 8071772 8072850 102582090 102579669 102631010 100842961 100843241 107801872 107798553
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