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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7455712   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 ppo-r.4   7455712   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 ppo-m.4   7455712   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 ppo-u.5   7474514   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 gma-u.5   100790952   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 gma-u.5   100527938   succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial 
 mtr-u.5   25484225   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 ath-u.5   AT2G20420   ATP citrate lyase (ACL) family protein 
 bra-r.6   103828176   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 vvi-u.5   100248061   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 ghi-r.1   107952883   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 ghi-r.1   107954629   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 ghi-r.1   107954628   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 bna-r.1   106450624   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial-like 
 bna-r.1   106380702   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 bna-r.1   106357563   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial-like 
 cit-r.1   102626700   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 sly-u.5   543863   succinyl CoA ligase beta subunit 
 sot-r.1   102577781   succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial 
 nta-r.1   107827369   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 nta-r.1   107820527   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 nta-r.1   107768302   succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial-like 
 osa-u.5   4330016   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial-like 
 zma-u.5   100284826   succinyl-CoA ligase beta-chain 
 zma-u.5   100284286   succinyl-CoA ligase beta-chain 
 tae-r.2   123144854   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 tae-r.2   123137501   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 tae-r.2   123127746   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 hvu-r.1   123401334   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 sbi-r.1   8066155   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 bdi-r.1   100835038   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 cre-r.1   CHLRE_17g703700v5   uncharacterized protein 

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Top 50 coexpressed genes to 7455712 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7455712 (ppo-u.5 coexpression data)

CoexMap"7455712"


ppoLOC7455712 | Entrez gene ID : 7455712    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 1 1 1 3 3 1 1 1 3 1 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00020 [list] [network] Citrate cycle (TCA cycle) (73 genes)
pop00640 [list] [network] Propanoate metabolism (59 genes)
pop01200 [list] [network] Carbon metabolism (347 genes)
GO BP
GO:0006104 [list] [network] succinyl-CoA metabolic process  (6 genes)  IEA  
GO:0006099 [list] [network] tricarboxylic acid cycle  (61 genes)  IEA  
GO CC
GO:0042709 [list] [network] succinate-CoA ligase complex  (9 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (675 genes)  IEA  
GO MF
GO:0004775 [list] [network] succinate-CoA ligase (ADP-forming) activity  (9 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (2135 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
Protein XP_002320625.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo_mito 5,  chlo 3  (predict for XP_002320625.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_002320625.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7455712
ppo-r.4
for
7455712
ppo-m.4
for
7455712
ppo-u.5
for
7474514
gma-u.5
for
100790952
gma-u.5
for
100527938
mtr-u.5
for
25484225
ath-u.5
for
AT2G20420
bra-r.6
for
103828176
vvi-u.5
for
100248061
ghi-r.1
for
107952883
ghi-r.1
for
107954629
ghi-r.1
for
107954628
bna-r.1
for
106450624
bna-r.1
for
106380702
bna-r.1
for
106357563
cit-r.1
for
102626700
sly-u.5
for
543863
sot-r.1
for
102577781
nta-r.1
for
107827369
nta-r.1
for
107820527
nta-r.1
for
107768302
osa-u.5
for
4330016
zma-u.5
for
100284826
zma-u.5
for
100284286
tae-r.2
for
123144854
tae-r.2
for
123137501
tae-r.2
for
123127746
hvu-r.1
for
123401334
sbi-r.1
for
8066155
bdi-r.1
for
100835038
cre-r.1
for
CHLRE_17g703700v5


Ortholog ID: 6495
Species ppo ppo gma gma mtr ath bra vvi ghi ghi ghi bna bna bna cit sly sot nta nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC7455712 LOC7474514 LOC100790952 LOC100527938 LOC25484225 AT2G20420 LOC103828176 LOC100248061 LOC107952883 LOC107954629 LOC107954628 LOC106450624 LOC106380702 LOC106357563 LOC102626700 LOC543863 LOC102577781 LOC107827369 LOC107820527 LOC107768302 LOC4330016 LOC100284826 LOC100284286 LOC123144854 LOC123137501 LOC123127746 LOC123401334 LOC8066155 LOC100835038 CHLRE_17g703700v5
Function* succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial ATP citrate lyase (ACL) family protein succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial-like succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial-like succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinyl CoA ligase beta subunit succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial-like succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial-like succinyl-CoA ligase beta-chain succinyl-CoA ligase beta-chain succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00510 N-Glycan biosynthesis 4
ppo00513 Various types of N-glycan biosynthesis 4
ppo04141 Protein processing in endoplasmic reticulum 4
ppo00970 Aminoacyl-tRNA biosynthesis 3
ppo00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 6
ppo00020 Citrate cycle (TCA cycle) 3
ppo01200 Carbon metabolism 3
ppo00300 Lysine biosynthesis 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 8
gma00020 Citrate cycle (TCA cycle) 8
gma01200 Carbon metabolism 8
gma00785 Lipoic acid metabolism 5
gma01210 2-Oxocarboxylic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 5
gma00020 Citrate cycle (TCA cycle) 4
gma00640 Propanoate metabolism 4
gma01200 Carbon metabolism 4
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 8
mtr00020 Citrate cycle (TCA cycle) 6
mtr01200 Carbon metabolism 6
mtr01210 2-Oxocarboxylic acid metabolism 4
mtr01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 6
ath00190 Oxidative phosphorylation 6
ath00020 Citrate cycle (TCA cycle) 5
ath00640 Propanoate metabolism 3
ath00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 5
bra00190 Oxidative phosphorylation 2
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00020 Citrate cycle (TCA cycle) 5
vvi01200 Carbon metabolism 5
vvi01210 2-Oxocarboxylic acid metabolism 4
vvi03050 Proteasome 4
vvi00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 4
ghi00640 Propanoate metabolism 4
ghi01200 Carbon metabolism 4
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 4
ghi00640 Propanoate metabolism 4
ghi01200 Carbon metabolism 4
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 4
ghi00640 Propanoate metabolism 4
ghi01200 Carbon metabolism 4
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 6
bna01200 Carbon metabolism 6
bna00640 Propanoate metabolism 4
bna00190 Oxidative phosphorylation 2
bna00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 6
bna01200 Carbon metabolism 6
bna00640 Propanoate metabolism 4
bna00010 Glycolysis / Gluconeogenesis 2
bna00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 6
bna01200 Carbon metabolism 6
bna00640 Propanoate metabolism 4
bna00010 Glycolysis / Gluconeogenesis 2
bna00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 6
cit00020 Citrate cycle (TCA cycle) 5
cit01210 2-Oxocarboxylic acid metabolism 3
cit01230 Biosynthesis of amino acids 3
cit00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00020 Citrate cycle (TCA cycle) 9
sly01200 Carbon metabolism 8
sly01210 2-Oxocarboxylic acid metabolism 6
sly00785 Lipoic acid metabolism 4
sly00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 8
sot00020 Citrate cycle (TCA cycle) 7
sot00190 Oxidative phosphorylation 5
sot01210 2-Oxocarboxylic acid metabolism 4
sot00640 Propanoate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 4
nta04141 Protein processing in endoplasmic reticulum 4
nta04144 Endocytosis 2
nta00061 Fatty acid biosynthesis 2
nta00780 Biotin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
nta01200 Carbon metabolism 3
nta01230 Biosynthesis of amino acids 3
nta00220 Arginine biosynthesis 2
nta00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta00061 Fatty acid biosynthesis 2
nta00780 Biotin metabolism 2
nta01212 Fatty acid metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 11
osa00020 Citrate cycle (TCA cycle) 9
osa00010 Glycolysis / Gluconeogenesis 6
osa01210 2-Oxocarboxylic acid metabolism 6
osa00620 Pyruvate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00020 Citrate cycle (TCA cycle) 12
zma01200 Carbon metabolism 12
zma01210 2-Oxocarboxylic acid metabolism 8
zma00640 Propanoate metabolism 6
zma00785 Lipoic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 10
zma00020 Citrate cycle (TCA cycle) 9
zma01210 2-Oxocarboxylic acid metabolism 6
zma00640 Propanoate metabolism 5
zma01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 11
tae00020 Citrate cycle (TCA cycle) 6
tae00640 Propanoate metabolism 6
tae00190 Oxidative phosphorylation 5
tae01230 Biosynthesis of amino acids 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 10
tae00020 Citrate cycle (TCA cycle) 6
tae00640 Propanoate metabolism 6
tae01230 Biosynthesis of amino acids 4
tae00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 10
tae00020 Citrate cycle (TCA cycle) 6
tae00640 Propanoate metabolism 6
tae01230 Biosynthesis of amino acids 4
tae00220 Arginine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 9
hvu00020 Citrate cycle (TCA cycle) 6
hvu01210 2-Oxocarboxylic acid metabolism 5
hvu01230 Biosynthesis of amino acids 5
hvu00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 10
sbi00020 Citrate cycle (TCA cycle) 6
sbi01200 Carbon metabolism 6
sbi01210 2-Oxocarboxylic acid metabolism 4
sbi00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 8
bdi00020 Citrate cycle (TCA cycle) 7
bdi00190 Oxidative phosphorylation 5
bdi00010 Glycolysis / Gluconeogenesis 5
bdi01210 2-Oxocarboxylic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 9
cre00020 Citrate cycle (TCA cycle) 8
cre00190 Oxidative phosphorylation 3
cre00640 Propanoate metabolism 2
cre00010 Glycolysis / Gluconeogenesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7455712 7474514 100790952 100527938 25484225 816561 103828176 100248061 107952883 107954629 107954628 106450624 106380702 106357563 102626700 543863 102577781 107827369 107820527 107768302 4330016 100284826 100284286 123144854 123137501 123127746 123401334 8066155 100835038 5717254
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