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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7456083   uncharacterized LOC7456083 
 ppo-r.4   7456083   uncharacterized LOC7456083 
 ppo-u.5   18094148   uncharacterized LOC18094148 
 gma-u.5   100809622   RNA-binding protein 34 
 gma-u.5   100784494   nucleolar protein 12 
 mtr-u.5   11434958   nucleolar protein 12 
 ath-u.5   AT5G46840   RNA-binding (RRM/RBD/RNP motifs) family protein 
 vvi-u.5   100266124   uncharacterized LOC100266124 
 sly-u.5   101252314   nucleolar protein 12 
 osa-u.5   4334825   uncharacterized LOC4334825 
 zma-u.5   100272319   uncharacterized LOC100272319 

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Top 50 coexpressed genes to 7456083 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7456083 (ppo-u.5 coexpression data)

CoexMap"7456083"


ppoLOC7456083 | Entrez gene ID : 7456083    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
Protein XP_002303427.4 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 3,  cyto 2  (predict for XP_002303427.4)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for XP_002303427.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7456083

.
ppo-r.4
for
7456083

.
ppo-u.5
for
18094148

.
gma-u.5
for
100809622

.
gma-u.5
for
100784494

.
mtr-u.5
for
11434958

.
ath-u.5
for
AT5G46840

.
vvi-u.5
for
100266124

.
sly-u.5
for
101252314

.
osa-u.5
for
4334825

.
zma-u.5
for
100272319

.


Ortholog ID: 9147
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna cre sbi sot cit bdi nta nta
Symbol AT5G46840 LOC100784494 LOC100809622 LOC101252314 LOC4334825 LOC100272319 LOC103827700 LOC100266124 LOC18094148 LOC7456083 LOC11434958 LOC123087507 LOC123114418 LOC123395191 LOC107946758 LOC107946681 LOC106401951 CHLRE_16g659150v5 LOC8060850 LOC102605654 LOC102629162 LOC100838851 LOC107825167 LOC107794415
Function* RNA-binding (RRM/RBD/RNP motifs) family protein nucleolar protein 12 RNA-binding protein 34 nucleolar protein 12 uncharacterized LOC4334825 uncharacterized LOC100272319 nucleolar protein 12 uncharacterized LOC100266124 uncharacterized LOC18094148 uncharacterized LOC7456083 nucleolar protein 12 nucleolar protein 12 nucleolar protein 12 nucleolar protein 12 RNA-binding protein 34 nucleolar protein 12 RNA-binding protein 34-like uncharacterized protein RNA-binding protein 34 nucleolar protein 12 uncharacterized LOC102629162 RNA-binding protein 34 uncharacterized LOC107825167 uncharacterized LOC107794415
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 2
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834728 100784494 100809622 101252314 4334825 100272319 103827700 100266124 18094148 7456083 11434958 123087507 123114418 123395191 107946758 107946681 106401951 66056561 8060850 102605654 102629162 100838851 107825167 107794415
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