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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7456232   transcription and mRNA export factor ENY2 
 ppo-r.4   7456232   transcription and mRNA export factor ENY2 
 ppo-u.5   112325634   transcription and mRNA export factor ENY2 
 gma-u.5   100527713   uncharacterized LOC100527713 
 gma-u.5   100500039   transcription and mRNA export factor ENY2 
 mtr-u.5   25497920   transcription and mRNA export factor ENY2 
 ath-u.5   AT3G27100   transcription/mRNA export factor 
 vvi-u.5   100258382   transcription and mRNA export factor ENY2 
 sly-u.5   101249142   transcription and mRNA export factor ENY2 
 osa-u.5   4327741   transcription and mRNA export factor ENY2 
 zma-u.5   100193962   uncharacterized LOC100193962 
 zma-u.5   100282361   uncharacterized LOC100282361 

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Top 50 coexpressed genes to 7456232 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7456232 (ppo-u.5 coexpression data)

CoexMap"7456232"


ppoLOC7456232 | Entrez gene ID : 7456232    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016973 [list] [network] poly(A)+ mRNA export from nucleus  (12 genes)  IEA  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (292 genes)  IEA  
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (481 genes)  IEA  
GO CC
GO:0071819 [list] [network] DUBm complex  (4 genes)  IEA  
GO:0000124 [list] [network] SAGA complex  (24 genes)  IEA  
GO:0005643 [list] [network] nuclear pore  (51 genes)  IEA  
GO MF
GO:0003713 [list] [network] transcription coactivator activity  (49 genes)  IEA  
GO:0003682 [list] [network] chromatin binding  (170 genes)  IEA  
Protein XP_002298626.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  mito 1,  cysk_nucl 1  (predict for XP_002298626.2)
Subcellular
localization
TargetP
other 8  (predict for XP_002298626.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7456232

.
ppo-r.4
for
7456232

.
ppo-u.5
for
112325634

.
gma-u.5
for
100527713

.
gma-u.5
for
100500039

.
mtr-u.5
for
25497920

.
ath-u.5
for
AT3G27100

.
vvi-u.5
for
100258382

.
sly-u.5
for
101249142

.
osa-u.5
for
4327741

.
zma-u.5
for
100193962

.
zma-u.5
for
100282361

.


Ortholog ID: 6278
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna cre sbi sot cit bdi nta nta
Symbol AT3G27100 LOC100500039 LOC100527713 LOC101249142 LOC4327741 LOC100193962 LOC100282361 LOC103836979 LOC100258382 LOC112325634 LOC7456232 LOC25497920 LOC123072011 LOC123063104 LOC123445232 LOC107904821 LOC107899720 LOC106415256 CHLRE_08g370300v5 LOC8079794 LOC102602973 LOC102608482 LOC100821187 LOC107816545 LOC107799432
Function* transcription/mRNA export factor transcription and mRNA export factor ENY2 uncharacterized LOC100527713 transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 uncharacterized LOC100193962 uncharacterized LOC100282361 transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 uncharacterized protein transcription and mRNA export factor SUS1 transcription and mRNA export factor SUS1 transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2-like transcription and mRNA export factor ENY2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma04144 Endocytosis 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 3
osa00600 Sphingolipid metabolism 2
osa04136 Autophagy - other 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
mtr04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 5
bna04120 Ubiquitin mediated proteolysis 2
bna04136 Autophagy - other 2
bna03008 Ribosome biogenesis in eukaryotes 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 3
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03050 Proteasome 3
bdi03020 RNA polymerase 2
bdi03420 Nucleotide excision repair 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta04120 Ubiquitin mediated proteolysis 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 5
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822329 100500039 100527713 101249142 4327741 100193962 100282361 103836979 100258382 112325634 7456232 25497920 123072011 123063104 123445232 107904821 107899720 106415256 5726834 8079794 102602973 102608482 100821187 107816545 107799432
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