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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7456272   RNA cytidine acetyltransferase 1 
 ppo-r.4   7456272   RNA cytidine acetyltransferase 1 
 ppo-m.4   7456272   RNA cytidine acetyltransferase 1 
 ppo-u.5   7477135   RNA cytidine acetyltransferase 2 
 gma-u.5   100812924   RNA cytidine acetyltransferase 1 
 gma-u.5   100788187   RNA cytidine acetyltransferase 1 
 mtr-u.5   11439952   RNA cytidine acetyltransferase 1 
 ath-u.5   AT3G57940   GNAT acetyltransferase (DUF699) 
 ath-u.5   AT1G10490   GNAT acetyltransferase (DUF699) 
 vvi-u.5   100259524   RNA cytidine acetyltransferase 1 
 sly-u.5   101258943   RNA cytidine acetyltransferase 2-like 
 osa-u.5   4351627   RNA cytidine acetyltransferase 1 
 zma-u.5   109941429   RNA cytidine acetyltransferase 1 

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Top 50 coexpressed genes to 7456272 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7456272 (ppo-u.5 coexpression data)

CoexMap"7456272"


ppoLOC7456272 | Entrez gene ID : 7456272    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03008 [list] [network] Ribosome biogenesis in eukaryotes (334 genes)
GO BP
GO:1904812 [list] [network] rRNA acetylation involved in maturation of SSU-rRNA  (2 genes)  IEA  
GO CC
GO:0030686 [list] [network] 90S preribosome  (48 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (220 genes)  IEA  
GO MF
GO:1990883 [list] [network] 18S rRNA cytidine N-acetyltransferase activity  (2 genes)  IEA  
GO:0000049 [list] [network] tRNA binding  (34 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
Protein XP_024461188.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9  (predict for XP_024461188.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for XP_024461188.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7456272

.
ppo-r.4
for
7456272

.
ppo-m.4
for
7456272

.
ppo-u.5
for
7477135

.
gma-u.5
for
100812924

.
gma-u.5
for
100788187

.
mtr-u.5
for
11439952

.
ath-u.5
for
AT3G57940

.
ath-u.5
for
AT1G10490

.
vvi-u.5
for
100259524

.
sly-u.5
for
101258943

.
osa-u.5
for
4351627

.
zma-u.5
for
109941429

.


Ortholog ID: 7629
Species ath ath gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT3G57940 AT1G10490 LOC100812924 LOC100788187 LOC101258943 LOC4351627 LOC109941429 LOC103841691 LOC103868091 LOC100259524 LOC7456272 LOC7477135 LOC11439952 LOC123098409 LOC123093134 LOC123449440 LOC107945510 LOC107926365 LOC106362417 LOC106453097 CHLRE_03g192850v5 LOC8083812 LOC102594215 LOC102624913 LOC100834315 LOC107820382 LOC107821045
Function* GNAT acetyltransferase (DUF699) GNAT acetyltransferase (DUF699) RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 2-like RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 2 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 2 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1-like RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1 uncharacterized protein RNA cytidine acetyltransferase 1 UPF0202 protein At1g10490-like RNA cytidine acetyltransferase 1-like RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1 RNA cytidine acetyltransferase 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
zma03013 Nucleocytoplasmic transport 3
zma03030 DNA replication 2
zma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 3
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824963 837589 100812924 100788187 101258943 4351627 109941429 103841691 103868091 100259524 7456272 7477135 11439952 123098409 123093134 123449440 107945510 107926365 106362417 106453097 5718691 8083812 102594215 102624913 100834315 107820382 107821045
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