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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7457504   probable CoA ligase CCL6 
 ppo-r.4   7457504   probable CoA ligase CCL6 
 ppo-m.4   7457504   probable CoA ligase CCL6 
 ppo-u.5   7497844   long chain acyl-CoA synthetase 4 
 ppo-u.5   7481419   long chain acyl-CoA synthetase 1 
 ppo-u.5   7472708   long chain acyl-CoA synthetase 4 
 gma-u.5   100818394   long chain acyl-CoA synthetase 1 
 gma-u.5   100816578   long chain acyl-CoA synthetase 1 
 gma-u.5   100814965   long chain acyl-CoA synthetase 4 
 mtr-u.5   11419994   long chain acyl-CoA synthetase 1 
 mtr-u.5   11427214   long chain acyl-CoA synthetase 1 
 mtr-u.5   11437197   long chain acyl-CoA synthetase 4 
 ath-u.5   LACS1   AMP-dependent synthetase and ligase family protein 
 ath-u.5   LACS3   AMP-dependent synthetase and ligase family protein 
 bra-r.6   103838201   long chain acyl-CoA synthetase 3 
 bra-r.6   103861474   long chain acyl-CoA synthetase 4 
 bra-r.6   103868651   long chain acyl-CoA synthetase 2 
 vvi-u.5   100257137   probable CoA ligase CCL6 
 vvi-u.5   100248587   long chain acyl-CoA synthetase 1 
 vvi-u.5   100265062   long chain acyl-CoA synthetase 4 
 ghi-r.1   107952077   long chain acyl-CoA synthetase 4 
 ghi-r.1   107950760   long chain acyl-CoA synthetase 4-like 
 ghi-r.1   107925470   long chain acyl-CoA synthetase 2 
 bna-r.1   125585495   long chain acyl-CoA synthetase 1-like 
 bna-r.1   106395304   long chain acyl-CoA synthetase 5 
 bna-r.1   106396257   long chain acyl-CoA synthetase 1-like 
 cit-r.1   102614799   long chain acyl-CoA synthetase 1 
 cit-r.1   102614637   probable CoA ligase CCL6 
 cit-r.1   102611380   long chain acyl-CoA synthetase 4 
 sly-u.5   101259379   probable CoA ligase CCL6 
 sly-u.5   101262955   long chain acyl-CoA synthetase 1 
 sly-u.5   101246288   long chain acyl-CoA synthetase 4-like 
 sot-r.1   102585952   long chain acyl-CoA synthetase 4-like 
 sot-r.1   102594336   long chain acyl-CoA synthetase 1 
 sot-r.1   102589531   long chain acyl-CoA synthetase 2 
 nta-r.1   107780776   long chain acyl-CoA synthetase 4-like 
 nta-r.1   107780949   long chain acyl-CoA synthetase 1 
 nta-r.1   107793159   long chain acyl-CoA synthetase 4-like 
 osa-u.5   4340187   long chain acyl-CoA synthetase 4 
 osa-u.5   4350728   probable CoA ligase CCL6 
 zma-u.5   100383523   putative AMP-dependent synthetase and ligase superfamily protein 
 zma-u.5   103632349   long chain acyl-CoA synthetase 4 
 zma-u.5   100281785   uncharacterized LOC100281785 
 tae-r.2   123113487   probable CoA ligase CCL6 
 tae-r.2   123078699   long chain acyl-CoA synthetase 4 
 tae-r.2   123070251   long chain acyl-CoA synthetase 4 
 hvu-r.1   123444002   long chain acyl-CoA synthetase 4-like 
 hvu-r.1   123452479   probable CoA ligase CCL6 
 hvu-r.1   123417511   long chain acyl-CoA synthetase 1 
 sbi-r.1   8058259   long chain acyl-CoA synthetase 4 
 sbi-r.1   8071348   long chain acyl-CoA synthetase 4 
 sbi-r.1   8071347   long chain acyl-CoA synthetase 4 
 bdi-r.1   100837824   long chain acyl-CoA synthetase 2 
 bdi-r.1   100830299   long chain acyl-CoA synthetase 4 
 bdi-r.1   100830679   long chain acyl-CoA synthetase 4 
 cre-r.1   CHLRE_13g566650v5   uncharacterized protein 
 cre-r.1   CHLRE_03g182050v5   uncharacterized protein 

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Top 50 coexpressed genes to 7457504 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7457504 (ppo-u.5 coexpression data)

CoexMap"7457504"


ppoLOC7457504 | Entrez gene ID : 7457504    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 6 3 3 2 3 3 3 3 3 3 3 3 2 3 3 3 3 3 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00061 [list] [network] Fatty acid biosynthesis (60 genes)
pop00071 [list] [network] Fatty acid degradation (65 genes)
pop01212 [list] [network] Fatty acid metabolism (95 genes)
pop04146 [list] [network] Peroxisome (120 genes)
GO BP
GO:0010025 [list] [network] wax biosynthetic process  (2 genes)  IEA  
GO:0010143 [list] [network] cutin biosynthetic process  (11 genes)  IEA  
GO:0006631 [list] [network] fatty acid metabolic process  (185 genes)  IEA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (618 genes)  IEA  
GO:0016020 [list] [network] membrane  (3780 genes)  IEA  
GO MF
GO:0004467 [list] [network] long-chain fatty acid-CoA ligase activity  (11 genes)  IEA  
Protein XP_002313075.1 [sequence] [blastp]
XP_024463881.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cyto_nucl 4,  nucl 3,  chlo 2  (predict for XP_002313075.1)
cyto 4,  cyto_nucl 4,  nucl 2,  chlo 2,  cysk 1  (predict for XP_024463881.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002313075.1)
other 8  (predict for XP_024463881.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7457504
ppo-r.4
for
7457504
ppo-m.4
for
7457504
ppo-u.5
for
7497844
ppo-u.5
for
7481419
ppo-u.5
for
7472708
gma-u.5
for
100818394
gma-u.5
for
100816578
gma-u.5
for
100814965
mtr-u.5
for
11419994
mtr-u.5
for
11427214
mtr-u.5
for
11437197
ath-u.5
for
LACS1
ath-u.5
for
LACS3
bra-r.6
for
103838201
bra-r.6
for
103861474
bra-r.6
for
103868651
vvi-u.5
for
100257137
vvi-u.5
for
100248587
vvi-u.5
for
100265062
ghi-r.1
for
107952077
ghi-r.1
for
107950760
ghi-r.1
for
107925470
bna-r.1
for
125585495
bna-r.1
for
106395304
bna-r.1
for
106396257
cit-r.1
for
102614799
cit-r.1
for
102614637
cit-r.1
for
102611380
sly-u.5
for
101259379
sly-u.5
for
101262955
sly-u.5
for
101246288
sot-r.1
for
102585952
sot-r.1
for
102594336
sot-r.1
for
102589531
nta-r.1
for
107780776
nta-r.1
for
107780949
nta-r.1
for
107793159
osa-u.5
for
4340187
osa-u.5
for
4350728
zma-u.5
for
100383523
zma-u.5
for
103632349
zma-u.5
for
100281785
tae-r.2
for
123113487
tae-r.2
for
123078699
tae-r.2
for
123070251
hvu-r.1
for
123444002
hvu-r.1
for
123452479
hvu-r.1
for
123417511
sbi-r.1
for
8058259
sbi-r.1
for
8071348
sbi-r.1
for
8071347
bdi-r.1
for
100837824
bdi-r.1
for
100830299
bdi-r.1
for
100830679
cre-r.1
for
CHLRE_13g566650v5
cre-r.1
for
CHLRE_03g182050v5


Ortholog ID: 563
Species ppo ppo ppo gma gma gma mtr mtr ath bra bra bra vvi vvi vvi ghi ghi ghi bna bna bna cit cit cit sly sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi cre cre
Symbol LOC7497844 LOC7481419 LOC7472708 LOC100807687 LOC100790536 LOC100795926 LOC11419994 LOC11437197 LACS4 LOC103833911 LOC103866392 LOC103843798 LOC100257137 LOC100248587 LOC100265062 LOC107924546 LOC107910005 LOC107922437 LOC106398733 LOC106392332 LOC106441492 LOC102614799 LOC102614637 LOC102611380 LOC101259379 LOC101262955 LOC101246288 LOC102585952 LOC102594336 LOC102589531 LOC107793159 LOC107794693 LOC107817773 LOC4350728 LOC4324393 LOC100383523 LOC100281785 LOC100281457 LOC123113487 LOC123078699 LOC123180312 LOC123444002 LOC123452479 LOC123395106 LOC110434084 LOC110429995 LOC8058626 LOC100830299 LOC100838694 CHLRE_13g566650v5 CHLRE_03g182050v5
Function* long chain acyl-CoA synthetase 4 long chain acyl-CoA synthetase 1 long chain acyl-CoA synthetase 4 long chain acyl-CoA synthetase 1 long chain acyl-CoA synthetase 1 long chain acyl-CoA synthetase 2 long chain acyl-CoA synthetase 1 long chain acyl-CoA synthetase 4 AMP-dependent synthetase and ligase family protein long chain acyl-CoA synthetase 5 long chain acyl-CoA synthetase 1 long chain acyl-CoA synthetase 1 probable CoA ligase CCL6 long chain acyl-CoA synthetase 1 long chain acyl-CoA synthetase 4 long chain acyl-CoA synthetase 4 long chain acyl-CoA synthetase 1 long chain acyl-CoA synthetase 2 long chain acyl-CoA synthetase 5 long chain acyl-CoA synthetase 1 long chain acyl-CoA synthetase 4 long chain acyl-CoA synthetase 1 probable CoA ligase CCL6 long chain acyl-CoA synthetase 4 probable CoA ligase CCL6 long chain acyl-CoA synthetase 1 long chain acyl-CoA synthetase 4-like long chain acyl-CoA synthetase 4-like long chain acyl-CoA synthetase 1 long chain acyl-CoA synthetase 2 long chain acyl-CoA synthetase 4-like long chain acyl-CoA synthetase 4-like long chain acyl-CoA synthetase 1 probable CoA ligase CCL6 long chain acyl-CoA synthetase 4 putative AMP-dependent synthetase and ligase superfamily protein uncharacterized LOC100281785 uncharacterized LOC100281457 probable CoA ligase CCL6 long chain acyl-CoA synthetase 4 long chain acyl-CoA synthetase 1 long chain acyl-CoA synthetase 4-like probable CoA ligase CCL6 long chain acyl-CoA synthetase 4-like long chain acyl-CoA synthetase 4-like long chain acyl-CoA synthetase 1-like long chain acyl-CoA synthetase 2 long chain acyl-CoA synthetase 4 long chain acyl-CoA synthetase 4 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00061 Fatty acid biosynthesis 2
ppo00071 Fatty acid degradation 2
ppo01212 Fatty acid metabolism 2
ppo04146 Peroxisome 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00062 Fatty acid elongation 5
ppo00073 Cutin, suberine and wax biosynthesis 4
ppo01212 Fatty acid metabolism 4
ppo01040 Biosynthesis of unsaturated fatty acids 3
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00061 Fatty acid biosynthesis 2
ppo00071 Fatty acid degradation 2
ppo01212 Fatty acid metabolism 2
ppo04146 Peroxisome 2
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01212 Fatty acid metabolism 6
gma00062 Fatty acid elongation 4
gma01040 Biosynthesis of unsaturated fatty acids 4
gma00561 Glycerolipid metabolism 2
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00061 Fatty acid biosynthesis 2
gma00071 Fatty acid degradation 2
gma01212 Fatty acid metabolism 2
gma04146 Peroxisome 2
gma00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 4
gma00062 Fatty acid elongation 4
gma04626 Plant-pathogen interaction 4
gma00061 Fatty acid biosynthesis 2
gma00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00071 Fatty acid degradation 4
mtr00010 Glycolysis / Gluconeogenesis 3
mtr00620 Pyruvate metabolism 3
mtr00350 Tyrosine metabolism 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 4
ath04144 Endocytosis 2
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra02010 ABC transporters 5
bra04626 Plant-pathogen interaction 4
bra04981 Folate transport and metabolism 3
bra00062 Fatty acid elongation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00073 Cutin, suberine and wax biosynthesis 3
bra00071 Fatty acid degradation 3
bra00010 Glycolysis / Gluconeogenesis 2
bra00053 Ascorbate and aldarate metabolism 2
bra00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00061 Fatty acid biosynthesis 2
vvi00071 Fatty acid degradation 2
vvi01212 Fatty acid metabolism 2
vvi04146 Peroxisome 2
vvi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 6
ghi03022 Basal transcription factors 2
ghi00061 Fatty acid biosynthesis 2
ghi00071 Fatty acid degradation 2
ghi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00071 Fatty acid degradation 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00053 Ascorbate and aldarate metabolism 2
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 4
ghi00061 Fatty acid biosynthesis 2
ghi00071 Fatty acid degradation 2
ghi01212 Fatty acid metabolism 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 6
bna00071 Fatty acid degradation 6
bna01212 Fatty acid metabolism 6
bna04146 Peroxisome 6
bna04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 6
bna00071 Fatty acid degradation 6
bna01212 Fatty acid metabolism 6
bna04146 Peroxisome 6
bna00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 6
bna00071 Fatty acid degradation 6
bna01212 Fatty acid metabolism 6
bna04146 Peroxisome 6
bna04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01212 Fatty acid metabolism 2
cit00062 Fatty acid elongation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00561 Glycerolipid metabolism 3
cit00564 Glycerophospholipid metabolism 3
cit00073 Cutin, suberine and wax biosynthesis 2
cit00061 Fatty acid biosynthesis 2
cit01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit00020 Citrate cycle (TCA cycle) 2
cit00620 Pyruvate metabolism 2
cit00630 Glyoxylate and dicarboxylate metabolism 2
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
sly00061 Fatty acid biosynthesis 2
sly01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00073 Cutin, suberine and wax biosynthesis 3
sly02010 ABC transporters 2
sly04981 Folate transport and metabolism 2
sly00071 Fatty acid degradation 2
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00061 Fatty acid biosynthesis 2
sot00071 Fatty acid degradation 2
sot01212 Fatty acid metabolism 2
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00061 Fatty acid biosynthesis 4
nta00071 Fatty acid degradation 4
nta01212 Fatty acid metabolism 4
nta04146 Peroxisome 4
nta00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00100 Steroid biosynthesis 4
nta00909 Sesquiterpenoid and triterpenoid biosynthesis 4
nta00061 Fatty acid biosynthesis 4
nta00071 Fatty acid degradation 4
nta01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00062 Fatty acid elongation 5
nta04626 Plant-pathogen interaction 5
nta00996 Biosynthesis of various alkaloids 2
nta00061 Fatty acid biosynthesis 2
nta00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00073 Cutin, suberine and wax biosynthesis 5
osa04146 Peroxisome 2
osa02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00071 Fatty acid degradation 4
osa01212 Fatty acid metabolism 4
osa00600 Sphingolipid metabolism 4
osa00592 alpha-Linolenic acid metabolism 3
osa04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00073 Cutin, suberine and wax biosynthesis 2
zma02010 ABC transporters 2
zma00561 Glycerolipid metabolism 2
zma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00071 Fatty acid degradation 4
zma01212 Fatty acid metabolism 3
zma00410 beta-Alanine metabolism 2
zma00561 Glycerolipid metabolism 2
zma00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00071 Fatty acid degradation 6
tae00061 Fatty acid biosynthesis 3
tae01212 Fatty acid metabolism 3
tae04146 Peroxisome 3
tae00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00061 Fatty acid biosynthesis 6
tae00071 Fatty acid degradation 6
tae01212 Fatty acid metabolism 6
tae04146 Peroxisome 6
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 5
tae00061 Fatty acid biosynthesis 4
tae01212 Fatty acid metabolism 4
tae00073 Cutin, suberine and wax biosynthesis 3
tae01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00061 Fatty acid biosynthesis 3
sbi00071 Fatty acid degradation 3
sbi01212 Fatty acid metabolism 3
sbi04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00062 Fatty acid elongation 4
sbi00196 Photosynthesis - antenna proteins 4
sbi04626 Plant-pathogen interaction 3
sbi01212 Fatty acid metabolism 2
sbi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi02010 ABC transporters 3
sbi04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 2
cre03060 Protein export 2
cre00620 Pyruvate metabolism 2
cre00710 Carbon fixation by Calvin cycle 2
cre01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 5
cre03272 Virion - Hepatitis viruses 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
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