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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7457802   nuclear pore complex protein NUP155 
 ppo-r.4   7457802   nuclear pore complex protein NUP155 
 ppo-m.4   7457802   nuclear pore complex protein NUP155 
 gma-u.5   100794352   nuclear pore complex protein NUP155 
 gma-u.5   100798527   nuclear pore complex protein NUP155 
 mtr-u.5   11416753   nuclear pore complex protein NUP155 
 ath-u.5   NUP155   nucleoporin 155 
 vvi-u.5   100243944   nuclear pore complex protein NUP155 
 sly-u.5   101246938   nuclear pore complex protein NUP155 
 osa-u.5   4340842   nuclear pore complex protein NUP155 
 zma-u.5   103639423   nuclear pore complex protein NUP155 
 zma-u.5   103632918   nuclear pore complex protein NUP155 

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Top 50 coexpressed genes to 7457802 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7457802 (ppo-u.5 coexpression data)

CoexMap"7457802"


ppoLOC7457802 | Entrez gene ID : 7457802    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03013 [list] [network] Nucleocytoplasmic transport (142 genes)
GO BP
GO:0036228 [list] [network] protein localization to nuclear inner membrane  (3 genes)  IEA  
GO:0000972 [list] [network] transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery  (8 genes)  IEA  
GO:0006405 [list] [network] RNA export from nucleus  (55 genes)  IEA  
GO:0006606 [list] [network] protein import into nucleus  (66 genes)  IEA  
GO CC
GO:0044611 [list] [network] nuclear pore inner ring  (2 genes)  IEA  
GO:0005643 [list] [network] nuclear pore  (51 genes)  IEA  
GO MF
GO:0017056 [list] [network] structural constituent of nuclear pore  (21 genes)  IEA  
Protein XP_002312462.4 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  E.R. 3,  E.R._plas 3,  plas 1,  cyto_nucl 1,  cysk_nucl 1  (predict for XP_002312462.4)
Subcellular
localization
TargetP
other 7  (predict for XP_002312462.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7457802

.
ppo-r.4
for
7457802

.
ppo-m.4
for
7457802

.
gma-u.5
for
100794352

.
gma-u.5
for
100798527

.
mtr-u.5
for
11416753

.
ath-u.5
for
NUP155

.
vvi-u.5
for
100243944

.
sly-u.5
for
101246938

.
osa-u.5
for
4340842

.
zma-u.5
for
103639423

.
zma-u.5
for
103632918

.


Ortholog ID: 8233
Species ath gma gma sly osa zma zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol NUP155 LOC100798527 LOC100794352 LOC101246938 LOC4340842 LOC103632918 LOC103639423 LOC103872279 LOC103842937 LOC100243944 LOC7457802 LOC11416753 LOC123085126 LOC123098195 LOC123449272 LOC107943466 LOC107909870 LOC106401290 LOC106434670 CHLRE_09g394350v5 LOC8056867 LOC102579146 LOC102629346 LOC100822271 LOC107789850 LOC107788317
Function* nucleoporin 155 nuclear pore complex protein NUP155 nuclear pore complex protein NUP155 nuclear pore complex protein NUP155 nuclear pore complex protein NUP155 nuclear pore complex protein NUP155 nuclear pore complex protein NUP155 nuclear pore complex protein NUP155 nuclear pore complex protein NUP155 nuclear pore complex protein NUP155 nuclear pore complex protein NUP155 nuclear pore complex protein NUP155 nuclear pore complex protein NUP155 nuclear pore complex protein NUP155 nuclear pore complex protein NUP155 nuclear pore complex protein NUP155 nuclear pore complex protein NUP155 nuclear pore complex protein NUP155 nuclear pore complex protein NUP155 uncharacterized protein nuclear pore complex protein NUP155 nuclear pore complex protein NUP155 nuclear pore complex protein NUP155 nuclear pore complex protein NUP155 nuclear pore complex protein NUP155-like nuclear pore complex protein NUP155
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 7
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03008 Ribosome biogenesis in eukaryotes 2
gma03013 Nucleocytoplasmic transport 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 5
sly03040 Spliceosome 4
sly03020 RNA polymerase 2
sly03015 mRNA surveillance pathway 2
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 5
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma00270 Cysteine and methionine metabolism 2
zma03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 4
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 7
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae03030 DNA replication 5
tae03420 Nucleotide excision repair 5
tae03430 Mismatch repair 5
tae03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 8
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00310 Lysine degradation 2
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00310 Lysine degradation 2
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 7
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03015 mRNA surveillance pathway 2
cit04120 Ubiquitin mediated proteolysis 2
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 4
bdi03410 Base excision repair 3
bdi03420 Nucleotide excision repair 3
bdi03430 Mismatch repair 3
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta03040 Spliceosome 2
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03040 Spliceosome 3
nta03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838050 100798527 100794352 101246938 4340842 103632918 103639423 103872279 103842937 100243944 7457802 11416753 123085126 123098195 123449272 107943466 107909870 106401290 106434670 5720133 8056867 102579146 102629346 100822271 107789850 107788317
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