ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7457839	plant UBX domain-containing protein 7
ppo-r.4	7457839	plant UBX domain-containing protein 7
ppo-m.4	7457839	plant UBX domain-containing protein 7
ppo-u.5	7462631	plant UBX domain-containing protein 7
gma-u.5	100795411	plant UBX domain-containing protein 7
gma-u.5	100780532	plant UBX domain-containing protein 7
mtr-u.5	11430917	plant UBX domain-containing protein 7
mtr-u.5	11421040	plant UBX domain-containing protein 7
mtr-u.5	11446508	plant UBX domain-containing protein 7
ath-u.5	AT1G14570	UBX domain-containing protein
vvi-u.5	100247740	plant UBX domain-containing protein 7
sly-u.5	101254474	plant UBX domain-containing protein 7
osa-u.5	4337356	plant UBX domain-containing protein 7
zma-u.5	103645784	plant UBX domain-containing protein 7
zma-u.5	100384688	uncharacterized LOC100384688

Annotation

functional annotation

KEGG

GO BP

GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process

(182 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(3662 genes)

IEA

GO MF

GO:0043130 [list] [network] ubiquitin binding

(80 genes)

IEA

Protein

XP_002311564.4 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto 1, vacu 1

(predict for XP_002311564.4)

Subcellular
localization
TargetP

other 7

(predict for XP_002311564.4)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7457839	ppo-r.4 for 7457839	ppo-m.4 for 7457839	ppo-u.5 for 7462631	gma-u.5 for 100795411	gma-u.5 for 100780532	mtr-u.5 for 11430917	mtr-u.5 for 11421040	mtr-u.5 for 11446508	ath-u.5 for AT1G14570	vvi-u.5 for 100247740	sly-u.5 for 101254474	osa-u.5 for 4337356	zma-u.5 for 103645784	zma-u.5 for 100384688

Ortholog

Ortholog ID: 3477

Species

ppo

gma

mtr

ath

vvi

ghi

cit

sly

sot

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

plant UBX domain-containing protein 7

UBX domain-containing protein

plant UBX domain-containing protein 7

uncharacterized LOC100384688

plant UBX domain-containing protein 7

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3
gma04130	SNARE interactions in vesicular transport	2
gma04144	Endocytosis	2
gma04517	IgSF CAM signaling	2
gma05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03050	Proteasome	7
ath04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04145	Phagosome	2
vvi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03050	Proteasome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03050	Proteasome	5
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	7
zma04075	Plant hormone signal transduction	4
zma04141	Protein processing in endoplasmic reticulum	2
zma00010	Glycolysis / Gluconeogenesis	2
zma00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	2
tae03015	mRNA surveillance pathway	2
tae03040	Spliceosome	2
tae00330	Arginine and proline metabolism	2
tae00410	beta-Alanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	5
bdi04144	Endocytosis	2
bdi04517	IgSF CAM signaling	2
bdi05100	Bacterial invasion of epithelial cells	2

Expression

Expression pattern

Entrez Gene ID^*

7457839

7462631

100795411

100780532

11430917

11421040

838019

100247740

107909936

107959976

102611052

101254474

102591255

4337356

103645784

100384688

123055131

123047330

123428400

8070305

100839367

5717535

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7457839 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7457839 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	2	3	1	1	1	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7457839 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7457839 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**