ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7457982	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic
ppo-r.4	7457982	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic
ppo-m.4	7457982	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic
ppo-u.5	112326048	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic
gma-u.5	100789283	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic
gma-u.5	100783283	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like
mtr-u.5	11406713	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic
ath-u.5	ABCI13	non-intrinsic ABC protein 11
vvi-u.5	100246248	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic
sly-u.5	ABCI5	ABC transporter I family member 5
osa-u.5	4333685	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic
zma-u.5	100280328	uncharacterized LOC100280328

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0016887 [list] [network] ATP hydrolysis activity	(550 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2559 genes)	IEA

Protein

XP_002320385.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, vacu 1, E.R._vacu 1

(predict for XP_002320385.2)

Subcellular
localization
TargetP

chlo 3

(predict for XP_002320385.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7457982 .	ppo-r.4 for 7457982 .	ppo-m.4 for 7457982 .	ppo-u.5 for 112326048 .	gma-u.5 for 100789283 .	gma-u.5 for 100783283 .	mtr-u.5 for 11406713 .	ath-u.5 for ABCI13 .	vvi-u.5 for 100246248 .	sly-u.5 for ABCI5 .	osa-u.5 for 4333685 .	zma-u.5 for 100280328 .

Ortholog

Ortholog ID: 9277

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

cre

sbi

sot

cit

bdi

nta

Symbol

ABCI13

ABCI5

Function^*

non-intrinsic ABC protein 11

protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic

protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like

ABC transporter I family member 5

protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic

uncharacterized LOC100280328

protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic

uncharacterized protein

protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00970	Aminoacyl-tRNA biosynthesis	2
sly01240	Biosynthesis of cofactors	2
sly00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00470	D-Amino acid metabolism	2
osa01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	7
ppo04075	Plant hormone signal transduction	6
ppo01200	Carbon metabolism	3
ppo00020	Citrate cycle (TCA cycle)	2
ppo00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	5
ppo03013	Nucleocytoplasmic transport	2
ppo03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00970	Aminoacyl-tRNA biosynthesis	4
tae00450	Selenocompound metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00450	Selenocompound metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03050	Proteasome	6
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03050	Proteasome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00270	Cysteine and methionine metabolism	2
sot00010	Glycolysis / Gluconeogenesis	2
sot00020	Citrate cycle (TCA cycle)	2
sot00620	Pyruvate metabolism	2
sot00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01200	Carbon metabolism	5
nta00620	Pyruvate metabolism	4
nta00020	Citrate cycle (TCA cycle)	3
nta00640	Propanoate metabolism	3
nta00450	Selenocompound metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00450	Selenocompound metabolism	2
nta00970	Aminoacyl-tRNA biosynthesis	2
nta03022	Basal transcription factors	2
nta03420	Nucleotide excision repair	2
nta00010	Glycolysis / Gluconeogenesis	2

Expression

Expression pattern

Entrez Gene ID^*

842852

100789283

100783283

101251573

4333685

100280328

103852232

100246248

112326048

7457982

11406713

123104861

123113142

123452047

107959421

107928247

106411314

106406729

66056555

8061670

102604192

102616401

100822073

107798851

107800208

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7457982 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7457982 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	sbi	nta	bra	cre	hvu	cit	bdi	sot	tae	bna	ghi
Paralog	4	2	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7457982 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7457982 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**