Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7458535   mediator of RNA polymerase II transcription subunit 21 
 ppo-r.4   7458535   mediator of RNA polymerase II transcription subunit 21 
 ppo-m.4   7458535   mediator of RNA polymerase II transcription subunit 21 
 gma-u.5   100306480   uncharacterized LOC100306480 
 mtr-u.5   25498057   mediator of RNA polymerase II transcription subunit 21 
 ath-u.5   MED21   mediator 21 
 sly-u.5   101256647   mediator of RNA polymerase II transcription subunit 21 
 osa-u.5   4344610   mediator of RNA polymerase II transcription subunit 21 
 zma-u.5   100383822   uncharacterized LOC100383822 

close


Top 50 coexpressed genes to 7458535 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 7458535 (ppo-u.5 coexpression data)

CoexMap"7458535"


ppoLOC7458535 | Entrez gene ID : 7458535    
Species ppo gma mtr ath sly osa zma hvu sot vvi tae nta bra cit ghi bna bdi sbi cre
Paralog 3 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (481 genes)  IEA  
GO CC
GO:0016592 [list] [network] mediator complex  (44 genes)  IEA  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (154 genes)  IEA  
Protein XP_002304917.1 [sequence] [blastp]
XP_024454844.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  cyto 2,  chlo 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_002304917.1)
chlo 3,  nucl 2,  cyto 2,  cyto_nucl 2,  chlo_mito 2  (predict for XP_024454844.1)
Subcellular
localization
TargetP
other 6  (predict for XP_002304917.1)
other 6  (predict for XP_024454844.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7458535

.
ppo-r.4
for
7458535

.
ppo-m.4
for
7458535

.
gma-u.5
for
100306480

.
mtr-u.5
for
25498057

.
ath-u.5
for
MED21

.
sly-u.5
for
101256647

.
osa-u.5
for
4344610

.
zma-u.5
for
100383822

.


Ortholog ID: 10166
Species ath gma sly osa zma bra ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol MED21 LOC100306480 LOC101256647 LOC4344610 LOC100383822 LOC103839814 LOC7458535 LOC25498057 LOC123159810 LOC123168305 LOC123411304 LOC107901952 LOC107961989 LOC106416181 LOC106366885 LOC8067794 LOC102592456 LOC102613901 LOC100827181 LOC107799049 LOC107811605
Function* mediator 21 uncharacterized LOC100306480 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 uncharacterized LOC100383822 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21 mediator of RNA polymerase II transcription subunit 21-like mediator of RNA polymerase II transcription subunit 21
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
tae03008 Ribosome biogenesis in eukaryotes 2
tae03083 Polycomb repressive complex 2
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 2
bna00230 Purine metabolism 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03083 Polycomb repressive complex 2
sot04120 Ubiquitin mediated proteolysis 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00620 Pyruvate metabolism 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825815 100306480 101256647 4344610 100383822 103839814 7458535 25498057 123159810 123168305 123411304 107901952 107961989 106416181 106366885 8067794 102592456 102613901 100827181 107799049 107811605
The preparation time of this page was 0.2 [sec].