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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7459920   thioredoxin-like fold domain-containing protein MRL7L, chloroplastic 
 ppo-r.4   7459920   thioredoxin-like fold domain-containing protein MRL7L, chloroplastic 
 ppo-m.4   7459920   thioredoxin-like fold domain-containing protein MRL7L, chloroplastic 
 gma-u.5   100793560   thioredoxin-like fold domain-containing protein MRL7L, chloroplastic 
 mtr-u.5   25485687   thioredoxin-like fold domain-containing protein MRL7L, chloroplastic 
 ath-u.5   MRL7-L   Thioredoxin superfamily protein 
 vvi-u.5   100245762   thioredoxin-like fold domain-containing protein MRL7L, chloroplastic 
 sly-u.5   101267802   thioredoxin-like fold domain-containing protein MRL7L, chloroplastic 
 osa-u.5   4338807   thioredoxin-like fold domain-containing protein MRL7L homolog, chloroplastic 
 zma-u.5   100272347l   uncharacterized LOC100272347 

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Top 50 coexpressed genes to 7459920 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7459920 (ppo-u.5 coexpression data)

CoexMap"7459920"


ppoLOC7459920 | Entrez gene ID : 7459920    
Species ppo gma mtr ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009658 [list] [network] chloroplast organization  (99 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1948 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (136 genes)  IEA  
GO MF
Protein XP_006380250.1 [sequence] [blastp]
XP_024461596.1 [sequence] [blastp]
XP_024461597.1 [sequence] [blastp]
XP_024461598.1 [sequence] [blastp]
XP_024461599.1 [sequence] [blastp]
XP_024461600.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 3,  cysk 1,  nucl_plas 1  (predict for XP_006380250.1)
nucl 4,  cyto 4,  cysk 1  (predict for XP_024461596.1)
nucl 4,  cyto 4,  cysk 1  (predict for XP_024461597.1)
cyto 5,  nucl 2,  cysk 1,  chlo 1,  extr 1,  cysk_plas 1  (predict for XP_024461598.1)
cyto 6,  nucl 2,  cysk 1  (predict for XP_024461599.1)
cyto 4,  nucl 3,  chlo 1,  cysk 1,  nucl_plas 1  (predict for XP_024461600.1)
Subcellular
localization
TargetP
other 6  (predict for XP_006380250.1)
other 6  (predict for XP_024461596.1)
other 6  (predict for XP_024461597.1)
other 6  (predict for XP_024461598.1)
other 6  (predict for XP_024461599.1)
other 6  (predict for XP_024461600.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7459920

.
ppo-r.4
for
7459920

.
ppo-m.4
for
7459920

.
gma-u.5
for
100793560

.
mtr-u.5
for
25485687

.
ath-u.5
for
MRL7-L

.
vvi-u.5
for
100245762

.
sly-u.5
for
101267802

.
osa-u.5
for
4338807

.
zma-u.5
for
100272347l

.


Ortholog ID: 11257
Species ath gma sly osa zma vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol MRL7-L LOC100793560 LOC101267802 LOC4338807 LOC100272347l LOC100245762 LOC7459920 LOC25485687 LOC123133352 LOC123182036 LOC123412902 LOC107891364 LOC107889374 LOC106387989 LOC106437713 LOC8085142 LOC102587975 LOC102609941 LOC100831843 LOC107820166 LOC107815079
Function* Thioredoxin superfamily protein thioredoxin-like fold domain-containing protein MRL7L, chloroplastic thioredoxin-like fold domain-containing protein MRL7L, chloroplastic thioredoxin-like fold domain-containing protein MRL7L homolog, chloroplastic uncharacterized LOC100272347 thioredoxin-like fold domain-containing protein MRL7L, chloroplastic thioredoxin-like fold domain-containing protein MRL7L, chloroplastic thioredoxin-like fold domain-containing protein MRL7L, chloroplastic thioredoxin-like fold domain-containing protein MRL7L homolog, chloroplastic thioredoxin-like fold domain-containing protein MRL7L homolog, chloroplastic thioredoxin-like fold domain-containing protein MRL7L homolog, chloroplastic thioredoxin-like fold domain-containing protein MRL7L, chloroplastic thioredoxin-like fold domain-containing protein MRL7L, chloroplastic thioredoxin-like fold domain-containing protein MRL7L, chloroplastic thioredoxin-like fold domain-containing protein MRL7L, chloroplastic thioredoxin-like fold domain-containing protein MRL7L homolog, chloroplastic uncharacterized LOC102587975 thioredoxin-like fold domain-containing protein MRL7L, chloroplastic thioredoxin-like fold domain-containing protein MRL7L homolog, chloroplastic thioredoxin-like fold domain-containing protein MRL7L, chloroplastic thioredoxin-like fold domain-containing protein MRL7L, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00240 Pyrimidine metabolism 2
tae01232 Nucleotide metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00240 Pyrimidine metabolism 2
tae01232 Nucleotide metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 4
ghi01230 Biosynthesis of amino acids 4
ghi00260 Glycine, serine and threonine metabolism 2
ghi00270 Cysteine and methionine metabolism 2
ghi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi03040 Spliceosome 4
ghi04141 Protein processing in endoplasmic reticulum 4
ghi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 3
bna00970 Aminoacyl-tRNA biosynthesis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817741 100793560 101267802 4338807 100272347 100245762 7459920 25485687 123133352 123182036 123412902 107891364 107889374 106387989 106437713 8085142 102587975 102609941 100831843 107820166 107815079
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