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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7459934   acetolactate synthase small subunit 2, chloroplastic 
 ppo-r.4   7459934   acetolactate synthase small subunit 2, chloroplastic 
 ppo-m.4   7459934   acetolactate synthase small subunit 2, chloroplastic 
 ppo-u.5   7462122   acetolactate synthase small subunit 1, chloroplastic 
 gma-u.5   100810297   acetolactate synthase small subunit 2, chloroplastic 
 gma-u.5   100779210   acetolactate synthase small subunit 2, chloroplastic 
 mtr-u.5   11426593   acetolactate synthase small subunit 2, chloroplastic 
 ath-u.5   AT2G31810   ACT domain-containing small subunit of acetolactate synthase protein 
 ath-u.5   VAT1   VALINE-TOLERANT 1 
 vvi-u.5   100261174   acetolactate synthase small subunit 1, chloroplastic 
 vvi-u.5   100256605   acetolactate synthase small subunit 1, chloroplastic 
 sly-u.5   101252944   acetolactate synthase small subunit 2, chloroplastic 
 sly-u.5   101265999   acetolactate synthase small subunit 1, chloroplastic 
 osa-u.5   4329938   acetolactate synthase small subunit 1, chloroplastic 
 osa-u.5   4350218   acetolactate synthase small subunit 1, chloroplastic 
 zma-u.5   100279727   uncharacterized LOC100279727 
 zma-u.5   100284799   acetolactate synthase/ amino acid binding protein 
 zma-u.5   100381801   Acetolactate synthase small subunit 1 chloroplastic 

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Top 50 coexpressed genes to 7459934 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7459934 (ppo-u.5 coexpression data)

CoexMap"7459934"


ppoLOC7459934 | Entrez gene ID : 7459934    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 1 2 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00290 [list] [network] Valine, leucine and isoleucine biosynthesis (18 genes)
pop00650 [list] [network] Butanoate metabolism (27 genes)
pop00660 [list] [network] C5-Branched dibasic acid metabolism (8 genes)
pop00770 [list] [network] Pantothenate and CoA biosynthesis (44 genes)
pop01210 [list] [network] 2-Oxocarboxylic acid metabolism (97 genes)
pop01230 [list] [network] Biosynthesis of amino acids (287 genes)
GO BP
GO:0009099 [list] [network] L-valine biosynthetic process  (7 genes)  IEA  
GO:0009097 [list] [network] isoleucine biosynthetic process  (10 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (1141 genes)  IEA  
GO MF
GO:1990610 [list] [network] acetolactate synthase regulator activity  (3 genes)  IEA  
GO:0003984 [list] [network] acetolactate synthase activity  (5 genes)  IEA  
Protein XP_024461372.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_024461372.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_024461372.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7459934

.
ppo-r.4
for
7459934

.
ppo-m.4
for
7459934

.
ppo-u.5
for
7462122

.
gma-u.5
for
100810297

.
gma-u.5
for
100779210

.
mtr-u.5
for
11426593

.
ath-u.5
for
AT2G31810

.
ath-u.5
for
VAT1

.
vvi-u.5
for
100261174

.
vvi-u.5
for
100256605

.
sly-u.5
for
101252944

.
sly-u.5
for
101265999

.
osa-u.5
for
4329938

.
osa-u.5
for
4350218

.
zma-u.5
for
100279727

.
zma-u.5
for
100284799

.
zma-u.5
for
100381801

.


Ortholog ID: 2799
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol VAT1 AT2G31810 LOC100810297 LOC100779210 LOC101265999 LOC101252944 LOC4350218 LOC4329938 LOC100381801 LOC100284799 LOC103851035 LOC103867697 LOC100261174 LOC100256605 LOC7459934 LOC11426593 LOC123144779 LOC123127668 LOC123447824 LOC123401417 LOC107927325 LOC107896886 LOC106387990 LOC106354460 CHLRE_01g055453v5 LOC8056510 LOC8076795 LOC102581549 LOC102600503 LOC102623499 LOC127901001 LOC100833289 LOC100821636 LOC107807238 LOC107782028
Function* VALINE-TOLERANT 1 ACT domain-containing small subunit of acetolactate synthase protein acetolactate synthase small subunit 2, chloroplastic acetolactate synthase small subunit 2, chloroplastic acetolactate synthase small subunit 1, chloroplastic acetolactate synthase small subunit 2, chloroplastic acetolactate synthase small subunit 1, chloroplastic acetolactate synthase small subunit 1, chloroplastic Acetolactate synthase small subunit 1 chloroplastic acetolactate synthase/ amino acid binding protein acetolactate synthase small subunit 1, chloroplastic acetolactate synthase small subunit 2, chloroplastic acetolactate synthase small subunit 1, chloroplastic acetolactate synthase small subunit 1, chloroplastic acetolactate synthase small subunit 2, chloroplastic acetolactate synthase small subunit 2, chloroplastic acetolactate synthase small subunit 2, chloroplastic acetolactate synthase small subunit 2, chloroplastic acetolactate synthase small subunit 2, chloroplastic-like acetolactate synthase small subunit 2, chloroplastic-like acetolactate synthase small subunit 2, chloroplastic acetolactate synthase small subunit 2, chloroplastic acetolactate synthase small subunit 2, chloroplastic-like acetolactate synthase small subunit 1, chloroplastic uncharacterized protein acetolactate synthase small subunit 2, chloroplastic acetolactate synthase small subunit 2, chloroplastic acetolactate synthase small subunit 1, chloroplastic-like acetolactate synthase small subunit 1, chloroplastic acetolactate synthase small subunit 1, chloroplastic acetolactate synthase small subunit 2, chloroplastic-like acetolactate synthase small subunit 2, chloroplastic acetolactate synthase small subunit 2, chloroplastic acetolactate synthase small subunit 2, chloroplastic acetolactate synthase small subunit 1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 17
ath01210 2-Oxocarboxylic acid metabolism 8
ath00290 Valine, leucine and isoleucine biosynthesis 7
ath00300 Lysine biosynthesis 4
ath00660 C5-Branched dibasic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 5
ath01210 2-Oxocarboxylic acid metabolism 3
ath00640 Propanoate metabolism 2
ath00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 9
gma01210 2-Oxocarboxylic acid metabolism 5
gma00290 Valine, leucine and isoleucine biosynthesis 4
gma00770 Pantothenate and CoA biosynthesis 4
gma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 10
gma01210 2-Oxocarboxylic acid metabolism 8
gma00290 Valine, leucine and isoleucine biosynthesis 6
gma00770 Pantothenate and CoA biosynthesis 3
gma00660 C5-Branched dibasic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 3
sly00290 Valine, leucine and isoleucine biosynthesis 2
sly01210 2-Oxocarboxylic acid metabolism 2
sly01230 Biosynthesis of amino acids 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 8
sly00010 Glycolysis / Gluconeogenesis 3
sly01200 Carbon metabolism 3
sly00290 Valine, leucine and isoleucine biosynthesis 3
sly00770 Pantothenate and CoA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 3
osa03008 Ribosome biogenesis in eukaryotes 2
osa00650 Butanoate metabolism 2
osa00770 Pantothenate and CoA biosynthesis 2
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 4
osa00250 Alanine, aspartate and glutamate metabolism 2
osa01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 6
zma00290 Valine, leucine and isoleucine biosynthesis 5
zma00770 Pantothenate and CoA biosynthesis 5
zma01210 2-Oxocarboxylic acid metabolism 5
zma00650 Butanoate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 6
zma00290 Valine, leucine and isoleucine biosynthesis 5
zma00770 Pantothenate and CoA biosynthesis 5
zma01210 2-Oxocarboxylic acid metabolism 5
zma00650 Butanoate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 6
bra01230 Biosynthesis of amino acids 4
bra00710 Carbon fixation by Calvin cycle 3
bra00260 Glycine, serine and threonine metabolism 3
bra00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 6
vvi00020 Citrate cycle (TCA cycle) 4
vvi01210 2-Oxocarboxylic acid metabolism 4
vvi01230 Biosynthesis of amino acids 4
vvi00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo00230 Purine metabolism 2
ppo00220 Arginine biosynthesis 2
ppo00250 Alanine, aspartate and glutamate metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 6
mtr00061 Fatty acid biosynthesis 4
mtr01212 Fatty acid metabolism 4
mtr00270 Cysteine and methionine metabolism 3
mtr00290 Valine, leucine and isoleucine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 8
tae00290 Valine, leucine and isoleucine biosynthesis 5
tae00770 Pantothenate and CoA biosynthesis 4
tae01210 2-Oxocarboxylic acid metabolism 4
tae00340 Histidine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 9
tae00290 Valine, leucine and isoleucine biosynthesis 6
tae01200 Carbon metabolism 4
tae00340 Histidine metabolism 3
tae00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 4
hvu01240 Biosynthesis of cofactors 3
hvu01200 Carbon metabolism 2
hvu00290 Valine, leucine and isoleucine biosynthesis 2
hvu00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 14
ghi00290 Valine, leucine and isoleucine biosynthesis 12
ghi01210 2-Oxocarboxylic acid metabolism 12
ghi00770 Pantothenate and CoA biosynthesis 8
ghi00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 14
ghi00290 Valine, leucine and isoleucine biosynthesis 12
ghi01210 2-Oxocarboxylic acid metabolism 12
ghi00770 Pantothenate and CoA biosynthesis 8
ghi00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00290 Valine, leucine and isoleucine biosynthesis 6
bna00650 Butanoate metabolism 6
bna00660 C5-Branched dibasic acid metabolism 6
bna00770 Pantothenate and CoA biosynthesis 6
bna01210 2-Oxocarboxylic acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00290 Valine, leucine and isoleucine biosynthesis 2
bna00650 Butanoate metabolism 2
bna00660 C5-Branched dibasic acid metabolism 2
bna00770 Pantothenate and CoA biosynthesis 2
bna01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 4
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 3
sbi01230 Biosynthesis of amino acids 3
sbi01210 2-Oxocarboxylic acid metabolism 2
sbi00030 Pentose phosphate pathway 2
sbi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00592 alpha-Linolenic acid metabolism 4
cit00591 Linoleic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00290 Valine, leucine and isoleucine biosynthesis 2
nta00650 Butanoate metabolism 2
nta00660 C5-Branched dibasic acid metabolism 2
nta00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta00290 Valine, leucine and isoleucine biosynthesis 2
nta00650 Butanoate metabolism 2
nta00660 C5-Branched dibasic acid metabolism 2
nta00770 Pantothenate and CoA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831490 817738 100810297 100779210 101265999 101252944 4350218 4329938 100381801 100284799 103851035 103867697 100261174 100256605 7459934 11426593 123144779 123127668 123447824 123401417 107927325 107896886 106387990 106354460 5725736 8056510 8076795 102581549 102600503 102623499 127901001 100833289 100821636 107807238 107782028
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