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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7461338   nuclear pore complex protein NUP214 
 ppo-r.4   7461338   nuclear pore complex protein NUP214 
 ppo-m.4   7461338   nuclear pore complex protein NUP214 
 gma-u.5   100806517   nuclear pore complex protein NUP214 
 gma-u.5   100794048   nuclear pore complex protein NUP214 
 mtr-u.5   25484132   nuclear pore complex protein NUP214 
 ath-u.5   LNO1   Nuclear pore complex protein 
 vvi-u.5   100245011   nuclear pore complex protein NUP214 
 sly-u.5   104645555   nuclear pore complex protein NUP214-like 
 sly-u.5   101268441   nuclear pore complex protein NUP214 
 osa-u.5   4344328   nuclear pore complex protein NUP214 
 zma-u.5   100276843   Nuclear pore complex protein NUP214 

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Top 50 coexpressed genes to 7461338 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7461338 (ppo-u.5 coexpression data)

CoexMap"7461338"


ppoLOC7461338 | Entrez gene ID : 7461338    
Species ppo gma mtr ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 3 2 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03013 [list] [network] Nucleocytoplasmic transport (142 genes)
GO BP
GO:0006405 [list] [network] RNA export from nucleus  (55 genes)  IEA  
GO CC
GO MF
GO:0017056 [list] [network] structural constituent of nuclear pore  (21 genes)  IEA  
Protein XP_002303977.4 [sequence] [blastp]
XP_024452075.2 [sequence] [blastp]
XP_052307090.1 [sequence] [blastp]
XP_052307091.1 [sequence] [blastp]
XP_052307092.1 [sequence] [blastp]
XP_052307093.1 [sequence] [blastp]
XP_052307094.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_002303977.4)
nucl 9  (predict for XP_024452075.2)
nucl 9  (predict for XP_052307090.1)
nucl 9  (predict for XP_052307091.1)
nucl 9,  cyto 1,  golg 1  (predict for XP_052307092.1)
nucl 9,  cyto 1,  golg 1  (predict for XP_052307093.1)
nucl 10  (predict for XP_052307094.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002303977.4)
other 9  (predict for XP_024452075.2)
other 9  (predict for XP_052307090.1)
other 9  (predict for XP_052307091.1)
other 9  (predict for XP_052307092.1)
other 9  (predict for XP_052307093.1)
other 9  (predict for XP_052307094.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7461338

.
ppo-r.4
for
7461338

.
ppo-m.4
for
7461338

.
gma-u.5
for
100806517

.
gma-u.5
for
100794048

.
mtr-u.5
for
25484132

.
ath-u.5
for
LNO1

.
vvi-u.5
for
100245011

.
sly-u.5
for
104645555

.
sly-u.5
for
101268441

.
osa-u.5
for
4344328

.
zma-u.5
for
100276843

.


Ortholog ID: 6733
Species ath gma gma sly sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi nta nta
Symbol LNO1 LOC100806517 LOC100794048 LOC104645555 LOC101268441 LOC4344328 LOC100276843 LOC103832578 LOC100245011 LOC7461338 LOC25484132 LOC123043644 LOC123051435 LOC123424681 LOC107954716 LOC107952716 LOC125577255 LOC106360365 CHLRE_07g313500v5 LOC8085294 LOC110433850 LOC107060800 LOC102587240 LOC102629053 LOC100824238 LOC107819522 LOC107802780
Function* Nuclear pore complex protein nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 nuclear pore complex protein NUP214-like nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 Nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 nuclear pore complex protein NUP214-like nuclear pore complex protein NUP214-like uncharacterized protein nuclear pore complex protein NUP214 nuclear pore complex protein NUP214-like uncharacterized LOC107060800 nuclear pore complex protein NUP214 hypothetical protein nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 nuclear pore complex protein NUP214
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 6
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
sly04120 Ubiquitin mediated proteolysis 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
bra04120 Ubiquitin mediated proteolysis 2
bra04136 Autophagy - other 2
bra04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 4
tae03015 mRNA surveillance pathway 3
tae03040 Spliceosome 2
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
tae03020 RNA polymerase 2
tae03420 Nucleotide excision repair 2
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03082 ATP-dependent chromatin remodeling 2
bna03013 Nucleocytoplasmic transport 2
bna00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
bna03013 Nucleocytoplasmic transport 4
bna03082 ATP-dependent chromatin remodeling 2
bna00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 3
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03040 Spliceosome 4
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03040 Spliceosome 4
nta03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842002 100806517 100794048 104645555 101268441 4344328 100276843 103832578 100245011 7461338 25484132 123043644 123051435 123424681 107954716 107952716 125577255 106360365 66053945 8085294 110433850 107060800 102587240 102629053 100824238 107819522 107802780
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