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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7461372   F-box/kelch-repeat protein At1g55270 
 ppo-r.4   7461372   F-box/kelch-repeat protein At1g55270 
 ppo-u.5   7483258   F-box/kelch-repeat protein At1g55270 
 gma-u.5   100796811   F-box/kelch-repeat protein At1g55270 
 gma-u.5   100788124   F-box/kelch-repeat protein At1g55270 
 gma-u.5   100780827   F-box/kelch-repeat protein At1g55270 
 mtr-u.5   11446637   F-box/kelch-repeat protein At1g55270 
 mtr-u.5   11417985   F-box/kelch-repeat protein At1g55270 
 ath-u.5   AT1G55270   Galactose oxidase/kelch repeat superfamily protein 
 vvi-u.5   100255323   F-box/kelch-repeat protein At1g55270-like 
 vvi-u.5   100243988   F-box/kelch-repeat protein At1g55270 
 sly-u.5   101255619   F-box/kelch-repeat protein At1g55270 
 sly-u.5   101251313   F-box/kelch-repeat protein At1g55270 
 osa-u.5   4331748   F-box/kelch-repeat protein At1g55270 
 osa-u.5   4348597   F-box/kelch-repeat protein At1g55270 
 zma-u.5   100284020   ring canal kelch 
 zma-u.5   100193397   uncharacterized LOC100193397 
 zma-u.5   100281098   kelch motif family protein 

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Top 50 coexpressed genes to 7461372 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7461372 (ppo-u.5 coexpression data)

CoexMap"7461372"


ppoLOC7461372 | Entrez gene ID : 7461372    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 3 2 1 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002304010.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  cysk 1,  cyto 1,  mito 1,  plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_002304010.2)
Subcellular
localization
TargetP
other 6  (predict for XP_002304010.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7461372

.
ppo-r.4
for
7461372

.
ppo-u.5
for
7483258

.
gma-u.5
for
100796811

.
gma-u.5
for
100788124

.
gma-u.5
for
100780827

.
mtr-u.5
for
11446637

.
mtr-u.5
for
11417985

.
ath-u.5
for
AT1G55270

.
vvi-u.5
for
100255323

.
vvi-u.5
for
100243988

.
sly-u.5
for
101255619

.
sly-u.5
for
101251313

.
osa-u.5
for
4331748

.
osa-u.5
for
4348597

.
zma-u.5
for
100284020

.
zma-u.5
for
100193397

.
zma-u.5
for
100281098

.


Ortholog ID: 2594
Species ath gma gma sly sly osa osa zma zma bra vvi vvi ppo ppo mtr mtr tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi nta nta
Symbol AT1G55270 LOC100780827 LOC100782411 LOC101255619 LOC101251313 LOC4348597 LOC4331748 LOC100281098 LOC100284020 LOC103829795 LOC100243988 LOC100255323 LOC7483258 LOC7461372 LOC11446637 LOC11417985 LOC123084800 LOC123449546 LOC123445733 LOC107962629 LOC107945481 LOC106406156 LOC106433604 LOC8062265 LOC8059831 LOC102596716 LOC102604982 LOC102627238 LOC102623158 LOC100844846 LOC107793154 LOC107763469
Function* Galactose oxidase/kelch repeat superfamily protein F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 kelch motif family protein ring canal kelch F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270-like F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270-like F-box/kelch-repeat protein At1g55270-like F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270-like F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 2
gma03015 mRNA surveillance pathway 2
gma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
sly04382 Cornified envelope formation 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00630 Glyoxylate and dicarboxylate metabolism 3
zma00220 Arginine biosynthesis 2
zma00250 Alanine, aspartate and glutamate metabolism 2
zma00910 Nitrogen metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
bra04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03040 Spliceosome 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00100 Steroid biosynthesis 2
sbi00561 Glycerolipid metabolism 2
sbi00564 Glycerophospholipid metabolism 2
sbi00565 Ether lipid metabolism 2
sbi00590 Arachidonic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00520 Amino sugar and nucleotide sugar metabolism 3
sot04712 Circadian rhythm - plant 3
sot00053 Ascorbate and aldarate metabolism 2
sot01240 Biosynthesis of cofactors 2
sot01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit00020 Citrate cycle (TCA cycle) 2
cit01210 2-Oxocarboxylic acid metabolism 2
cit00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 9
bdi03020 RNA polymerase 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841972 100780827 100782411 101255619 101251313 4348597 4331748 100281098 100284020 103829795 100243988 100255323 7483258 7461372 11446637 11417985 123084800 123449546 123445733 107962629 107945481 106406156 106433604 8062265 8059831 102596716 102604982 102627238 102623158 100844846 107793154 107763469
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