ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7462100	laccase-12
ppo-r.4	7462100	laccase-12
ppo-m.4	7462100	laccase-12
ppo-u.5	7462101	laccase-12
ppo-u.5	7464613	laccase-12
ppo-u.5	7464614	laccase-12
gma-u.5	547704	diphenol oxidase laccase
gma-u.5	100806093	laccase-3
gma-u.5	100808948	laccase-12
mtr-u.5	11410085	laccase-3
mtr-u.5	11411380	laccase-12
mtr-u.5	11434534	laccase-5
ath-u.5	LAC3	laccase 3
ath-u.5	LAC5	laccase 5
ath-u.5	LAC12	laccase 12
vvi-u.5	100262045	laccase-12
sly-u.5	101251392	laccase-3-like
osa-u.5	4349566	putative laccase-17
osa-u.5	4327522	laccase-3-like
osa-u.5	4351276	laccase-23-like
zma-u.5	103654275	laccase-23
zma-u.5	100502492	putative laccase family protein
zma-u.5	100282094	L-ascorbate oxidase

Annotation

functional annotation

KEGG

GO BP

GO:0046274 [list] [network] lignin catabolic process

(41 genes)

IEA

GO CC

GO:0048046 [list] [network] apoplast

(92 genes)

IEA

GO MF

GO:0052716 [list] [network] hydroquinone:oxygen oxidoreductase activity	(41 genes)	IEA
GO:0005507 [list] [network] copper ion binding	(101 genes)	IEA

Protein

XP_002312186.3 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, vacu 3, chlo_mito 3

(predict for XP_002312186.3)

Subcellular
localization
TargetP

scret 9

(predict for XP_002312186.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7462100	ppo-r.4 for 7462100	ppo-m.4 for 7462100	ppo-u.5 for 7462101	ppo-u.5 for 7464613	ppo-u.5 for 7464614	gma-u.5 for 547704	gma-u.5 for 100806093	gma-u.5 for 100808948	mtr-u.5 for 11410085	mtr-u.5 for 11411380	mtr-u.5 for 11434534	ath-u.5 for LAC3	ath-u.5 for LAC5	ath-u.5 for LAC12	vvi-u.5 for 100262045	sly-u.5 for 101251392	osa-u.5 for 4349566	osa-u.5 for 4327522	osa-u.5 for 4351276	zma-u.5 for 103654275	zma-u.5 for 100502492	zma-u.5 for 100282094

Ortholog

Ortholog ID: 825

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

LAC13

LAC3

Function^*

laccase-12

laccase-3

laccase-5

laccase-3

laccase 13

laccase 3

laccase-3

laccase-5

laccase-12

laccase-13

laccase-5

laccase-13

laccase-12-like

laccase-13

laccase-12-like

laccase-12

laccase-3-like

laccase-12-like

laccase-3

laccase-12-like

laccase-12

laccase-23-like

laccase-3-like

laccase-23

putative laccase family protein

laccase-3

putative laccase-17

laccase-3

laccase-23

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath02010	ABC transporters	4
ath04981	Folate transport and metabolism	4
ath00561	Glycerolipid metabolism	2
ath00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00460	Cyanoamino acid metabolism	2
bra00500	Starch and sucrose metabolism	2
bra00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00073	Cutin, suberine and wax biosynthesis	4
bra00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00600	Sphingolipid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00360	Phenylalanine metabolism	2
sly00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	2
sot00941	Flavonoid biosynthesis	2
sot00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2
sot00073	Cutin, suberine and wax biosynthesis	2
sot04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00073	Cutin, suberine and wax biosynthesis	3
nta00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	3
nta02010	ABC transporters	2
nta04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00073	Cutin, suberine and wax biosynthesis	3
tae02010	ABC transporters	3
tae04981	Folate transport and metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00940	Phenylpropanoid biosynthesis	3
tae00053	Ascorbate and aldarate metabolism	2
tae01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00073	Cutin, suberine and wax biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00940	Phenylpropanoid biosynthesis	2
sbi00073	Cutin, suberine and wax biosynthesis	2
sbi02010	ABC transporters	2
sbi04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00940	Phenylpropanoid biosynthesis	2
bdi00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00940	Phenylpropanoid biosynthesis	4

Expression

Expression pattern

Entrez Gene ID^*

7464613

7464614

100785427

100796956

11434534

11410085

830604

817571

103867971

103866955

100262045

107927043

107962127

106446093

106419221

102616340

102609228

101262618

101251392

102578240

102590317

107783942

107823893

4351276

4327522

103654275

100502492

123071258

123120487

123397646

123440584

8085414

100845885

100835168

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7462100 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7462100 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	6	3	3	3	1	1	3	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7462100 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7462100 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**