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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7462386   ATP-dependent DNA helicase At3g02060, chloroplastic 
 ppo-r.4   7462386   ATP-dependent DNA helicase At3g02060, chloroplastic 
 ppo-m.4   7462386   ATP-dependent DNA helicase At3g02060, chloroplastic 
 ppo-u.5   7466312   ATP-dependent DNA helicase At3g02060, chloroplastic 
 gma-u.5   100805206   ATP-dependent DNA helicase At3g02060, chloroplastic 
 gma-u.5   100791900   ATP-dependent DNA helicase At3g02060, chloroplastic 
 mtr-u.5   11437254   ATP-dependent DNA helicase At3g02060, chloroplastic 
 ath-u.5   AT3G02060   DEAD/DEAH box helicase 
 vvi-u.5   100251594   ATP-dependent DNA helicase At3g02060, chloroplastic 
 sly-u.5   101256820   putative ATP-dependent DNA helicase 
 osa-u.5   4350646   ATP-dependent DNA helicase At3g02060, chloroplastic 
 zma-u.5   103648038   ATP-dependent DNA helicase chloroplastic 

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Top 50 coexpressed genes to 7462386 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7462386 (ppo-u.5 coexpression data)

CoexMap"7462386"


ppoLOC7462386 | Entrez gene ID : 7462386    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006281 [list] [network] DNA repair  (290 genes)  IEA  
GO CC
GO MF
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4002 genes)  IEA  
Protein XP_052306188.1 [sequence] [blastp]
XP_052306189.1 [sequence] [blastp]
XP_052306190.1 [sequence] [blastp]
XP_052306191.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_052306188.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_052306189.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_052306190.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_052306191.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_052306188.1)
chlo 8  (predict for XP_052306189.1)
chlo 8  (predict for XP_052306190.1)
chlo 8  (predict for XP_052306191.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7462386

.
ppo-r.4
for
7462386

.
ppo-m.4
for
7462386

.
ppo-u.5
for
7466312

.
gma-u.5
for
100805206

.
gma-u.5
for
100791900

.
mtr-u.5
for
11437254

.
ath-u.5
for
AT3G02060

.
vvi-u.5
for
100251594

.
sly-u.5
for
101256820

.
osa-u.5
for
4350646

.
zma-u.5
for
103648038

.


Ortholog ID: 10093
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta
Symbol AT3G02060 LOC100805206 LOC100791900 LOC101256820 LOC4350646 LOC103648038 LOC103849865 LOC100251594 LOC7466312 LOC7462386 LOC11437254 LOC123086150 LOC123092079 LOC123448538 LOC107888449 LOC121221199 LOC125602319 LOC106436512 LOC8056979 LOC102592949 LOC102609921 LOC100828428 LOC107814304
Function* DEAD/DEAH box helicase ATP-dependent DNA helicase At3g02060, chloroplastic ATP-dependent DNA helicase At3g02060, chloroplastic putative ATP-dependent DNA helicase ATP-dependent DNA helicase At3g02060, chloroplastic ATP-dependent DNA helicase chloroplastic ATP-dependent DNA helicase At3g02060, chloroplastic ATP-dependent DNA helicase At3g02060, chloroplastic ATP-dependent DNA helicase At3g02060, chloroplastic ATP-dependent DNA helicase At3g02060, chloroplastic ATP-dependent DNA helicase At3g02060, chloroplastic ATP-dependent DNA helicase At3g02060, chloroplastic ATP-dependent DNA helicase At3g02060, chloroplastic ATP-dependent DNA helicase At3g02060, chloroplastic ATP-dependent DNA helicase At3g02060, chloroplastic ATP-dependent DNA helicase At3g02060, chloroplastic ATP-dependent DNA helicase At3g02060, chloroplastic ATP-dependent DNA helicase At3g02060, chloroplastic ATP-dependent DNA helicase At3g02060, chloroplastic transcription-repair-coupling factor ATP-dependent DNA helicase At3g02060, chloroplastic ATP-dependent DNA helicase At3g02060, chloroplastic ATP-dependent DNA helicase At3g02060, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 2
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
ath03440 Homologous recombination 2
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma03010 Ribosome 2
gma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821294 100805206 100791900 101256820 4350646 103648038 103849865 100251594 7466312 7462386 11437254 123086150 123092079 123448538 107888449 121221199 125602319 106436512 8056979 102592949 102609921 100828428 107814304
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