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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7463047   alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic 
 ppo-r.4   7463047   alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic 
 ppo-u.5   7481544   alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic 
 ppo-u.5   7481498   alpha-glucan phosphorylase, H isozyme 
 ppo-u.5   18097490   uncharacterized LOC18097490 
 gma-u.5   100806646   alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic 
 gma-u.5   100779066   glycogen phosphorylase 1 
 gma-u.5   100789789   alpha-glucan phosphorylase, H isozyme 
 mtr-u.5   11445705   alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic 
 mtr-u.5   25490769   alpha-glucan phosphorylase, H isozyme 
 mtr-u.5   25480821   alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic 
 ath-u.5   PHS1   Glycosyl transferase, family 35 
 ath-u.5   PHS2   alpha-glucan phosphorylase 2 
 vvi-u.5   100264186   uncharacterized LOC100264186 
 vvi-u.5   100257811   alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic 
 vvi-u.5   100245621   alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic 
 sly-u.5   101248295   alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic 
 sly-u.5   PHO1a   plastidial alpha-glucan phosphorylase 
 sly-u.5   101261874   uncharacterized LOC101261874 
 osa-u.5   4324810   alpha-glucan phosphorylase, H isozyme 
 osa-u.5   4334171   alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic 
 zma-u.5   pho1   starch phosphorylase1 
 zma-u.5   100285259   uncharacterized LOC100285259 

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Top 50 coexpressed genes to 7463047 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7463047 (ppo-u.5 coexpression data)

CoexMap"7463047"


ppoLOC7463047 | Entrez gene ID : 7463047    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 3 2 3 3 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00500 [list] [network] Starch and sucrose metabolism (188 genes)
GO BP
GO:0005980 [list] [network] glycogen catabolic process  (4 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (6111 genes)  IEA  
GO MF
GO:0008184 [list] [network] glycogen phosphorylase activity  (4 genes)  IEA  
GO:0030170 [list] [network] pyridoxal phosphate binding  (105 genes)  IEA  
Protein XP_024455164.2 [sequence] [blastp]
XP_052308019.1 [sequence] [blastp]
XP_052308020.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 4,  nucl 1  (predict for XP_024455164.2)
chlo 8,  chlo_mito 4,  nucl 1  (predict for XP_052308019.1)
chlo 8,  chlo_mito 4,  nucl 1  (predict for XP_052308020.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_024455164.2)
chlo 9  (predict for XP_052308019.1)
chlo 9  (predict for XP_052308020.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7463047

.
ppo-r.4
for
7463047

.
ppo-u.5
for
7481544

.
ppo-u.5
for
7481498

.
ppo-u.5
for
18097490

.
gma-u.5
for
100806646

.
gma-u.5
for
100779066

.
gma-u.5
for
100789789

.
mtr-u.5
for
11445705

.
mtr-u.5
for
25490769

.
mtr-u.5
for
25480821

.
ath-u.5
for
PHS1

.
ath-u.5
for
PHS2

.
vvi-u.5
for
100264186

.
vvi-u.5
for
100257811

.
vvi-u.5
for
100245621

.
sly-u.5
for
101248295

.
sly-u.5
for
PHO1a

.
sly-u.5
for
101261874

.
osa-u.5
for
4324810

.
osa-u.5
for
4334171

.
zma-u.5
for
pho1

.
zma-u.5
for
100285259

.


Ortholog ID: 1507
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol PHS2 PHS1 LOC100789789 LOC100779066 LOC101248295 LOC101261874 LOC4334171 LOC4324810 pho1 LOC100285259 LOC103875081 LOC103854138 LOC100257811 LOC100245621 LOC18097490 LOC7463047 LOC25490769 LOC11443309 LOC123105082 LOC123062617 LOC123444877 LOC123444878 LOC107905809 LOC107892378 LOC106410260 LOC106371101 CHLRE_12g552200v5 CHLRE_07g336950v5 LOC110431626 LOC8060105 LOC102578187 LOC102577532 LOC102625638 LOC102606996 LOC100827967 LOC100828538 LOC107810306 LOC107771409
Function* alpha-glucan phosphorylase 2 Glycosyl transferase, family 35 alpha-glucan phosphorylase, H isozyme glycogen phosphorylase 1 alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic uncharacterized LOC101261874 alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic alpha-glucan phosphorylase, H isozyme starch phosphorylase1 uncharacterized LOC100285259 alpha-glucan phosphorylase 1 alpha-glucan phosphorylase 1 alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic uncharacterized LOC18097490 alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic alpha-glucan phosphorylase, H isozyme glycogen phosphorylase 1 alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic alpha-glucan phosphorylase, H isozyme-like alpha-glucan phosphorylase, H isozyme alpha-glucan phosphorylase, H isozyme-like glycogen phosphorylase 1 alpha-glucan phosphorylase 1 alpha-glucan phosphorylase 1 alpha-glucan phosphorylase 1 uncharacterized protein uncharacterized protein alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic alpha-glucan phosphorylase, H isozyme glycogen phosphorylase 1-like alpha-glucan phosphorylase type H isozyme alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic alpha-glucan phosphorylase 2, cytosolic alpha-glucan phosphorylase, H isozyme alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 9
ath00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 5
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00730 Thiamine metabolism 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03060 Protein export 2
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 11
osa00520 Amino sugar and nucleotide sugar metabolism 3
osa01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 10
zma00260 Glycine, serine and threonine metabolism 2
zma00261 Monobactam biosynthesis 2
zma00270 Cysteine and methionine metabolism 2
zma00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 7
zma01240 Biosynthesis of cofactors 2
zma00010 Glycolysis / Gluconeogenesis 2
zma00052 Galactose metabolism 2
zma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04145 Phagosome 3
bra04517 IgSF CAM signaling 3
bra04814 Motor proteins 3
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 3
vvi00195 Photosynthesis 2
vvi00730 Thiamine metabolism 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 5
vvi00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 4
mtr00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 6
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
mtr04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 19
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 11
tae00010 Glycolysis / Gluconeogenesis 2
tae00030 Pentose phosphate pathway 2
tae00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
ghi00230 Purine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 15
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 9
bna00860 Porphyrin metabolism 3
bna01240 Biosynthesis of cofactors 3
bna00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 9
bna00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 5
cre01230 Biosynthesis of amino acids 4
cre00500 Starch and sucrose metabolism 4
cre00030 Pentose phosphate pathway 4
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 5
cre00500 Starch and sucrose metabolism 5
cre01230 Biosynthesis of amino acids 4
cre00030 Pentose phosphate pathway 4
cre00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 13
sbi00520 Amino sugar and nucleotide sugar metabolism 3
sbi01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 11
sot00520 Amino sugar and nucleotide sugar metabolism 3
sot01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 5
cit00520 Amino sugar and nucleotide sugar metabolism 2
cit01250 Biosynthesis of nucleotide sugars 2
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 6
cit00520 Amino sugar and nucleotide sugar metabolism 2
cit01250 Biosynthesis of nucleotide sugars 2
cit00073 Cutin, suberine and wax biosynthesis 2
cit00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 7
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 9
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00460 Cyanoamino acid metabolism 2
nta00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 6
nta04142 Lysosome 2
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823850 822590 100789789 100779066 101248295 101261874 4334171 4324810 100170240 100285259 103875081 103854138 100257811 100245621 18097490 7463047 25490769 11443309 123105082 123062617 123444877 123444878 107905809 107892378 106410260 106371101 5719681 5725629 110431626 8060105 102578187 102577532 102625638 102606996 100827967 100828538 107810306 107771409
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