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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7463208   probable beta-D-xylosidase 7 
 ppo-r.4   7463208   probable beta-D-xylosidase 7 
 ppo-m.4   7463208   probable beta-D-xylosidase 7 
 gma-u.5   100780688   probable beta-D-xylosidase 7 
 gma-u.5   100801565   probable beta-D-xylosidase 7 
 gma-u.5   100812757   probable beta-D-xylosidase 7 
 mtr-u.5   120580484   probable beta-D-xylosidase 7 
 mtr-u.5   11427355   probable beta-D-xylosidase 7 
 mtr-u.5   11432485   probable beta-D-xylosidase 7 
 ath-u.5   AT1G78060   Glycosyl hydrolase family protein 
 vvi-u.5   100262668   probable beta-D-xylosidase 7 
 vvi-u.5   100265962   probable beta-D-xylosidase 7 
 sly-u.5   Arf/Xyl3   alpha-L-arabinofuranosidase/beta-xylosidase 
 sly-u.5   Arf/Xyl4   alpha-L-arabinofuranosidase/beta-xylosidase 
 osa-u.5   4330750   probable beta-D-xylosidase 7 
 osa-u.5   4350320   probable beta-D-xylosidase 7 
 zma-u.5   100191418   putative O-Glycosyl hydrolase superfamily protein 
 zma-u.5   100502339   putative O-Glycosyl hydrolase superfamily protein 
 zma-u.5   103646920   probable beta-D-xylosidase 7 

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Top 50 coexpressed genes to 7463208 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7463208 (ppo-u.5 coexpression data)

CoexMap"7463208"


ppoLOC7463208 | Entrez gene ID : 7463208    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 3 3 1 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031222 [list] [network] arabinan catabolic process  (16 genes)  IEA  
GO:0045493 [list] [network] xylan catabolic process  (16 genes)  IEA  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (68 genes)  IEA  
GO MF
GO:0009044 [list] [network] xylan 1,4-beta-xylosidase activity  (16 genes)  IEA  
GO:0046556 [list] [network] alpha-L-arabinofuranosidase activity  (20 genes)  IEA  
Protein XP_002302285.2 [sequence] [blastp]
Subcellular
localization
wolf
vacu 6,  chlo 1,  nucl 1,  mito 1,  plas 1,  extr 1,  golg 1,  chlo_mito 1,  nucl_plas 1,  golg_plas 1,  mito_plas 1  (predict for XP_002302285.2)
Subcellular
localization
TargetP
scret 4  (predict for XP_002302285.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7463208

.
ppo-r.4
for
7463208

.
ppo-m.4
for
7463208

.
gma-u.5
for
100780688

.
gma-u.5
for
100801565

.
gma-u.5
for
100812757

.
mtr-u.5
for
120580484

.
mtr-u.5
for
11427355

.
mtr-u.5
for
11432485

.
ath-u.5
for
AT1G78060

.
vvi-u.5
for
100262668

.
vvi-u.5
for
100265962

.
sly-u.5
for
Arf/Xyl3

.
sly-u.5
for
Arf/Xyl4

.
osa-u.5
for
4330750

.
osa-u.5
for
4350320

.
zma-u.5
for
100191418

.
zma-u.5
for
100502339

.
zma-u.5
for
103646920

.


Ortholog ID: 2186
Species ath gma gma sly sly osa zma zma bra vvi vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit bdi bdi nta
Symbol AT1G78060 LOC100801565 LOC100780688 Arf/Xyl3 Arf/Xyl4 LOC4350302 LOC100502339 LOC100191418 LOC103832229 LOC100262668 LOC100265962 LOC7463208 LOC25489424 LOC11427355 LOC123075607 LOC123093020 LOC123449358 LOC123402524 LOC107937548 LOC107922477 LOC106400096 LOC106354576 LOC8155716 LOC8075695 LOC102598405 LOC102604870 LOC102614614 LOC100826449 LOC100839124 LOC107776309
Function* Glycosyl hydrolase family protein probable beta-D-xylosidase 7 probable beta-D-xylosidase 7 alpha-L-arabinofuranosidase/beta-xylosidase alpha-L-arabinofuranosidase/beta-xylosidase probable beta-D-xylosidase 7 putative O-Glycosyl hydrolase superfamily protein putative O-Glycosyl hydrolase superfamily protein probable beta-D-xylosidase 7 probable beta-D-xylosidase 7 probable beta-D-xylosidase 7 probable beta-D-xylosidase 7 probable beta-D-xylosidase 7 probable beta-D-xylosidase 7 probable beta-D-xylosidase 7 probable beta-D-xylosidase 7 probable beta-D-xylosidase 7 probable beta-D-xylosidase 7 probable beta-D-xylosidase 7 probable beta-D-xylosidase 7 probable beta-D-xylosidase 7 probable beta-D-xylosidase 7 probable beta-D-xylosidase 7 probable beta-D-xylosidase 7 probable beta-D-xylosidase 7 probable beta-D-xylosidase 7 probable beta-D-xylosidase 7 probable beta-D-xylosidase 7 probable beta-D-xylosidase 7 putative beta-D-xylosidase 7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
gma00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
bra01200 Carbon metabolism 2
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra01250 Biosynthesis of nucleotide sugars 2
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 2
hvu00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00053 Ascorbate and aldarate metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 4
ghi03010 Ribosome 4
ghi00053 Ascorbate and aldarate metabolism 2
ghi00230 Purine metabolism 2
ghi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 5
bna01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 5
bna01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00430 Taurine and hypotaurine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00430 Taurine and hypotaurine metabolism 5
sot03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 2
cit01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00062 Fatty acid elongation 2
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 5
nta00460 Cyanoamino acid metabolism 3
nta00999 Biosynthesis of various plant secondary metabolites 3
nta04145 Phagosome 3
nta04517 IgSF CAM signaling 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844141 100801565 100780688 101055560 101055561 4350302 100502339 100191418 103832229 100262668 100265962 7463208 25489424 11427355 123075607 123093020 123449358 123402524 107937548 107922477 106400096 106354576 8155716 8075695 102598405 102604870 102614614 100826449 100839124 107776309
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