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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7463602   formate--tetrahydrofolate ligase 
 ppo-r.4   7463602   formate--tetrahydrofolate ligase 
 ppo-m.4   7463602   formate--tetrahydrofolate ligase 
 ppo-u.5   7455752   formate--tetrahydrofolate ligase 
 gma-u.5   100806844   formate--tetrahydrofolate ligase 
 gma-u.5   100782213   formate--tetrahydrofolate ligase 
 mtr-u.5   11428805   formate--tetrahydrofolate ligase 
 ath-u.5   THFS   10-formyltetrahydrofolate synthetase 
 vvi-u.5   100255218   formate--tetrahydrofolate ligase 
 sly-u.5   101265950   formate--tetrahydrofolate ligase 
 osa-u.5   4347204   formate--tetrahydrofolate ligase 
 zma-u.5   541944   formate--tetrahydrofolate ligase 

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Top 50 coexpressed genes to 7463602 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7463602 (ppo-u.5 coexpression data)

CoexMap"7463602"


ppoLOC7463602 | Entrez gene ID : 7463602    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00670 [list] [network] One carbon pool by folate (51 genes)
pop01200 [list] [network] Carbon metabolism (347 genes)
pop01240 [list] [network] Biosynthesis of cofactors (298 genes)
GO BP
GO CC
GO MF
GO:0004329 [list] [network] formate-tetrahydrofolate ligase activity  (2 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
Protein XP_002304017.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  mito 1,  chlo 1,  nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_002304017.1)
Subcellular
localization
TargetP
scret 6,  other 5  (predict for XP_002304017.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7463602

.
ppo-r.4
for
7463602

.
ppo-m.4
for
7463602

.
ppo-u.5
for
7455752

.
gma-u.5
for
100806844

.
gma-u.5
for
100782213

.
mtr-u.5
for
11428805

.
ath-u.5
for
THFS

.
vvi-u.5
for
100255218

.
sly-u.5
for
101265950

.
osa-u.5
for
4347204

.
zma-u.5
for
541944

.


Ortholog ID: 8282
Species ath gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol THFS LOC100782213 LOC100806844 LOC101265950 LOC4347204 LOC541944 LOC103871345 LOC103868620 LOC100255218 LOC7455752 LOC7463602 LOC11428805 LOC123103922 LOC123112155 LOC123398418 LOC107939256 LOC107936203 LOC106405654 LOC106368826 CHLRE_13g566000v5 LOC8081018 LOC102587729 LOC102616080 LOC100821958 LOC107830687 LOC107808503
Function* 10-formyltetrahydrofolate synthetase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase uncharacterized protein formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase formate--tetrahydrofolate ligase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 7
ath00020 Citrate cycle (TCA cycle) 3
ath00480 Glutathione metabolism 3
ath01210 2-Oxocarboxylic acid metabolism 3
ath00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 4
gma00670 One carbon pool by folate 3
gma01200 Carbon metabolism 3
gma01240 Biosynthesis of cofactors 3
gma00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma00670 One carbon pool by folate 3
gma01240 Biosynthesis of cofactors 3
gma01230 Biosynthesis of amino acids 3
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01210 2-Oxocarboxylic acid metabolism 7
sly01230 Biosynthesis of amino acids 7
sly01200 Carbon metabolism 5
sly00020 Citrate cycle (TCA cycle) 3
sly00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 8
osa01200 Carbon metabolism 5
osa00010 Glycolysis / Gluconeogenesis 3
osa01210 2-Oxocarboxylic acid metabolism 3
osa01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 7
zma00190 Oxidative phosphorylation 6
zma00030 Pentose phosphate pathway 4
zma00010 Glycolysis / Gluconeogenesis 3
zma01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 4
bra01240 Biosynthesis of cofactors 3
bra00670 One carbon pool by folate 3
bra00920 Sulfur metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 3
bra01240 Biosynthesis of cofactors 3
bra00670 One carbon pool by folate 3
bra00270 Cysteine and methionine metabolism 2
bra00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 4
vvi00620 Pyruvate metabolism 3
vvi00710 Carbon fixation by Calvin cycle 2
vvi00061 Fatty acid biosynthesis 2
vvi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
ppo01240 Biosynthesis of cofactors 3
ppo00670 One carbon pool by folate 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
ppo00053 Ascorbate and aldarate metabolism 3
ppo00260 Glycine, serine and threonine metabolism 2
ppo00670 One carbon pool by folate 2
ppo00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 2
mtr00564 Glycerophospholipid metabolism 2
mtr00592 alpha-Linolenic acid metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 6
tae01240 Biosynthesis of cofactors 4
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 6
tae01240 Biosynthesis of cofactors 5
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 6
hvu01240 Biosynthesis of cofactors 4
hvu01230 Biosynthesis of amino acids 4
hvu01210 2-Oxocarboxylic acid metabolism 4
hvu00020 Citrate cycle (TCA cycle) 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00030 Pentose phosphate pathway 2
ghi00670 One carbon pool by folate 2
ghi01200 Carbon metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00030 Pentose phosphate pathway 2
ghi00670 One carbon pool by folate 2
ghi01200 Carbon metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00670 One carbon pool by folate 4
bna01200 Carbon metabolism 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00670 One carbon pool by folate 4
bna01200 Carbon metabolism 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 7
cre00061 Fatty acid biosynthesis 4
cre01212 Fatty acid metabolism 4
cre00620 Pyruvate metabolism 4
cre00640 Propanoate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 3
sbi03015 mRNA surveillance pathway 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00920 Sulfur metabolism 5
sot00270 Cysteine and methionine metabolism 4
sot01320 Sulfur cycle 4
sot01200 Carbon metabolism 4
sot01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 3
bdi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 6
nta00020 Citrate cycle (TCA cycle) 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta01210 2-Oxocarboxylic acid metabolism 4
nta01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 7
nta01230 Biosynthesis of amino acids 5
nta00020 Citrate cycle (TCA cycle) 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta01210 2-Oxocarboxylic acid metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841470 100782213 100806844 101265950 4347204 541944 103871345 103868620 100255218 7455752 7463602 11428805 123103922 123112155 123398418 107939256 107936203 106405654 106368826 5719052 8081018 102587729 102616080 100821958 107830687 107808503
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