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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7464671   pentatricopeptide repeat-containing protein At4g02820, mitochondrial 
 ppo-r.4   7464671   pentatricopeptide repeat-containing protein At4g02820, mitochondrial 
 ppo-m.4   7464671   pentatricopeptide repeat-containing protein At4g02820, mitochondrial 
 gma-u.5   100807681   pentatricopeptide repeat-containing protein At4g02820, mitochondrial 
 mtr-u.5   11434151   pentatricopeptide repeat-containing protein At4g02820, mitochondrial 
 ath-u.5   AT4G02820   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100264809   pentatricopeptide repeat-containing protein At4g02820, mitochondrial 
 sly-u.5   101246827   pentatricopeptide repeat-containing protein At4g02820, mitochondrial 
 osa-u.5   9272023   pentatricopeptide repeat-containing protein At4g02820, mitochondrial 
 zma-u.5   100285395   tetratricopeptide-like helical 

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Top 50 coexpressed genes to 7464671 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7464671 (ppo-u.5 coexpression data)

CoexMap"7464671"


ppoLOC7464671 | Entrez gene ID : 7464671    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (675 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002307578.1 [sequence] [blastp]
XP_024457104.1 [sequence] [blastp]
XP_024457105.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  cyto_mito 1,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for XP_002307578.1)
chlo 6,  mito 1,  cyto_mito 1,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for XP_024457104.1)
cyto 6,  chlo 1,  nucl 1,  vacu 1,  golg 1,  chlo_mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_024457105.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_002307578.1)
mito 7  (predict for XP_024457104.1)
other 7  (predict for XP_024457105.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7464671

.
ppo-r.4
for
7464671

.
ppo-m.4
for
7464671

.
gma-u.5
for
100807681

.
mtr-u.5
for
11434151

.
ath-u.5
for
AT4G02820

.
vvi-u.5
for
100264809

.
sly-u.5
for
101246827

.
osa-u.5
for
9272023

.
zma-u.5
for
100285395

.


Ortholog ID: 10208
Species ath gma sly osa zma bra vvi ppo mtr tae hvu ghi ghi bna bna sbi sot sot cit bdi nta nta
Symbol AT4G02820 LOC100807681 LOC101246827 LOC9272023 LOC100285395 LOC103868190 LOC100264809 LOC7464671 LOC11434151 LOC123110851 LOC123452472 LOC107930437 LOC107936857 LOC106397190 LOC106381600 LOC8067218 LOC102591148 LOC102586806 LOC102617494 LOC100822884 LOC107774982 LOC107765159
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g02820, mitochondrial pentatricopeptide repeat-containing protein At4g02820, mitochondrial pentatricopeptide repeat-containing protein At4g02820, mitochondrial tetratricopeptide-like helical pentatricopeptide repeat-containing protein At4g02820, mitochondrial pentatricopeptide repeat-containing protein At4g02820, mitochondrial pentatricopeptide repeat-containing protein At4g02820, mitochondrial pentatricopeptide repeat-containing protein At4g02820, mitochondrial pentatricopeptide repeat-containing protein At4g02820, mitochondrial pentatricopeptide repeat-containing protein At4g02820, mitochondrial pentatricopeptide repeat-containing protein At4g02820, mitochondrial pentatricopeptide repeat-containing protein At4g02820, mitochondrial pentatricopeptide repeat-containing protein At4g02820, mitochondrial-like pentatricopeptide repeat-containing protein At4g02820, mitochondrial pentatricopeptide repeat-containing protein At4g02820, mitochondrial pentatricopeptide repeat-containing protein At4g02820, mitochondrial-like pentatricopeptide repeat-containing protein At4g02820, mitochondrial-like pentatricopeptide repeat-containing protein At4g02820, mitochondrial pentatricopeptide repeat-containing protein At4g02820, mitochondrial pentatricopeptide repeat-containing protein At4g02820, mitochondrial-like pentatricopeptide repeat-containing protein At4g02820, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 9
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna00730 Thiamine metabolism 2
bna01232 Nucleotide metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
bna00230 Purine metabolism 2
bna00730 Thiamine metabolism 2
bna01232 Nucleotide metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00061 Fatty acid biosynthesis 2
sbi00780 Biotin metabolism 2
sbi01212 Fatty acid metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828169 100807681 101246827 9272023 100285395 103868190 100264809 7464671 11434151 123110851 123452472 107930437 107936857 106397190 106381600 8067218 102591148 102586806 102617494 100822884 107774982 107765159
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